Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC007496.3-201ENST00000624987 3443 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.23-201ENST00000362496 106 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 RNU4-84P-201ENST00000364200 139 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-1248P-201ENST00000391096 64 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 MIR1911-201ENST00000410783 80 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 AL035423.1-201ENST00000420331 213 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 AC019205.3-201ENST00000424573 156 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 SNORA70.14-201ENST00000516205 110 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-1282P-201ENST00000516735 96 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 RN7SKP57-201ENST00000517248 293 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 SUMO2P18-201ENST00000518873 252 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 TGIF1P1-201ENST00000558095 802 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 MIR3684-201ENST00000579779 74 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 AL451007.1-201ENST00000595491 289 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.778-201ENST00000620203 90 ntBASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.87□□□□□ -1.63
ZC3H4Q9UPT8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC099654.7-201ENST00000635788 2127 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-324P-201ENST00000363957 106 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 U1.1-201ENST00000384101 164 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.500-201ENST00000384466 111 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AP000567.1-201ENST00000406413 156 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AL139247.1-201ENST00000422768 325 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC091179.3-201ENST00000474761 144 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC104619.4-201ENST00000510773 249 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC009163.5-201ENST00000575421 637 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 MIR5187-201ENST00000583479 76 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 AC092435.4-201ENST00000623012 4159 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 ADAM3A-203ENST00000461344 2157 ntBASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.86□□□□□ -1.63
ZC3H4Q9UPT8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 AC002546.1-201ENST00000588041 2504 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.75-201ENST00000362927 97 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-818P-201ENST00000364837 108 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-1310P-201ENST00000384153 107 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.629-201ENST00000411368 105 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 CYCSP35-201ENST00000451978 304 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 PPBPP1-201ENST00000510807 373 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.797-201ENST00000515977 94 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 RNA5SP154-201ENST00000516193 111 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 SNORA31.16-201ENST00000516773 139 ntBASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZC3H4Q9UPT8 NEAT1-202ENST00000501122 22743 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 FAM35BP-202ENST00000497389 3337 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 RNU1-44P-201ENST00000384453 163 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 MIR888-201ENST00000401186 77 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AL591034.1-201ENST00000407447 340 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 RNA5SP475-201ENST00000410568 110 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 SNORA71B-202ENST00000439232 272 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 RPL23AP62-201ENST00000463396 453 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AC005840.1-201ENST00000498412 377 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AC009127.3-201ENST00000570531 403 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 AC006380.1-201ENST00000603598 186 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms