Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AC010889.1-201ENST00000566193 2666 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNU6-1188P-201ENST00000363795 107 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNA5SP99-201ENST00000364020 114 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 Y_RNA.259-201ENST00000364619 101 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 MIR517A-201ENST00000385001 87 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNY4P36-201ENST00000391116 96 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNA5SP425-201ENST00000410336 112 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNU6-293P-201ENST00000411259 106 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RPS15AP10-201ENST00000432472 382 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AL161651.1-201ENST00000440882 223 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AC006026.2-201ENST00000457376 180 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 SNORD5.1-201ENST00000458800 75 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AK3P2-201ENST00000507976 429 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 SNORA31.18-201ENST00000517043 134 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 RNU1-54P-201ENST00000517181 120 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 CR383656.8-201ENST00000549046 145 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AL133255.1-201ENST00000606374 441 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 AL627309.6-201ENST00000606857 840 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 ZNF72P-201ENST00000425869 1908 ntBASIC3.23□□□□□ -1.89
HDAC9Q9UKV0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 MIR1289-2-201ENST00000408360 111 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 USP9YP30-201ENST00000430729 455 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AL133396.1-201ENST00000432048 687 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC018437.1-201ENST00000492214 406 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 HMGN1P13-201ENST00000505795 138 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 ACA59.2-201ENST00000517061 156 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 MIR4648-201ENST00000580107 72 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AL391813.1-201ENST00000603098 260 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC091152.3-201ENST00000604227 325 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AP000654.2-201ENST00000605633 586 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC124303.1-201ENST00000605703 360 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 RPL23AP88-201ENST00000605759 454 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 AC090574.1-201ENST00000623186 233 ntBASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC9Q9UKV0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.21□□□□□ -1.89
HDAC9Q9UKV0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.89
HDAC9Q9UKV0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HDAC9Q9UKV0 AC135776.4-201ENST00000624300 1904 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AL161431.1-201ENST00000618966 4205 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RPL9P7-201ENST00000330965 580 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RNU1-109P-201ENST00000383960 147 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 SNORD116-20-201ENST00000384529 92 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 MTCYBP4-201ENST00000401524 249 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC236972.2-201ENST00000434979 310 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RNU7-152P-201ENST00000458982 64 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RPL9P9-202ENST00000466501 579 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC090616.3-201ENST00000582184 217 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC011494.1-201ENST00000596454 237 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 VN1R107P-201ENST00000601784 209 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AC019193.3-201ENST00000609144 554 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 MIR7111-201ENST00000619751 72 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 AL160413.1-201ENST00000622780 310 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 CTSLP2-204ENST00000629029 392 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 MIR7515-201ENST00000637837 67 ntBASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC9Q9UKV0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 MTND1P14-201ENST00000427400 950 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 DAP3P1-201ENST00000441522 278 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AL353705.4-201ENST00000449661 238 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 MED28P2-201ENST00000475771 317 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms