Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RPL23AP22-201ENST00000437556 453 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 RPL21P10-201ENST00000463521 490 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 AC109329.1-201ENST00000518744 317 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 HSPE1P20-201ENST00000538133 289 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.276-201ENST00000364732 109 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 RNU6-574P-201ENST00000384265 107 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 SNORA26.3-201ENST00000391119 136 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC012306.1-201ENST00000423267 114 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC006989.1-201ENST00000427212 131 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC004383.1-201ENST00000438135 289 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 BX510359.1-201ENST00000456973 237 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 RN7SL601P-201ENST00000471221 293 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AIG1P1-201ENST00000503376 148 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.713-201ENST00000517013 96 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC022868.1-201ENST00000517767 391 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AC034114.1-201ENST00000520293 285 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 AL121655.1-201ENST00000605811 308 ntBASIC3.97□□□□□ -1.77
DDX41Q9UJV9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DDX41Q9UJV9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
DDX41Q9UJV9 RNA5SP139-201ENST00000364340 117 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 RNY3P4-201ENST00000384428 101 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 RNU1-101P-201ENST00000391171 127 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 RNA5SP120-201ENST00000410900 112 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX41Q9UJV9 AC005326.1-201ENST00000429197 123 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX41Q9UJV9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 IGKV2-26-201ENST00000518305 343 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 AC068657.1-201ENST00000520807 306 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX41Q9UJV9 PWAR6-201ENST00000552334 4618 ntBASIC3.96□□□□□ -1.78
DDX41Q9UJV9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
DDX41Q9UJV9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 RNU6-702P-201ENST00000364982 107 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 Y_RNA.319-201ENST00000365138 92 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AP001324.2-201ENST00000461163 319 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AC090525.1-201ENST00000479116 478 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AC092185.1-201ENST00000491371 97 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 RPS27P26-201ENST00000494583 239 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 SNORA25.11-201ENST00000515935 105 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 RNA5SP380-201ENST00000517190 98 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 AP002770.2-201ENST00000543613 532 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 MIR3671-201ENST00000580455 88 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 MIR3651-201ENST00000630427 90 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 SNORD98-201ENST00000636377 67 ntBASIC3.95□□□□□ -1.78
DDX41Q9UJV9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
DDX41Q9UJV9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 RNU6-799P-201ENST00000363567 107 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 Y_RNA.193-201ENST00000363979 102 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 SNORA36A-201ENST00000384221 132 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 RNU1-139P-201ENST00000391307 165 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 U3.39-201ENST00000408569 239 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 RNU6-1140P-201ENST00000410517 106 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AL358075.3-201ENST00000426289 226 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 SDAD1P3-201ENST00000427380 333 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 RPL36AP48-201ENST00000485521 314 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AC093663.1-201ENST00000497190 394 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 RNY3P15-201ENST00000516297 97 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 AL450472.1-202ENST00000637286 180 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 U6.104-201ENST00000637979 90 ntBASIC3.94□□□□□ -1.78
DDX41Q9UJV9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX41Q9UJV9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RNU6-222P-201ENST00000362438 107 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RNU5F-3P-201ENST00000363767 117 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RNA5SP42-201ENST00000364278 115 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RNU6-879P-201ENST00000364328 108 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RN7SKP111-201ENST00000410349 271 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 Z92545.1-201ENST00000411782 234 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RPS26P42-201ENST00000413485 326 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RPL21P2-201ENST00000440049 481 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms