Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
USP25Q9UHP3 AC104695.3-201ENST00000604052 296 ntBASIC3.42□□□□□ -1.86
USP25Q9UHP3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.42□□□□□ -1.86
USP25Q9UHP3 uc_338.14-201ENST00000613162 166 ntBASIC3.42□□□□□ -1.86
USP25Q9UHP3 AC010205.1-201ENST00000616668 449 ntBASIC3.42□□□□□ -1.86
USP25Q9UHP3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.42□□□□□ -1.86
USP25Q9UHP3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.42□□□□□ -1.86
USP25Q9UHP3 AL606534.2-204ENST00000635008 178 ntBASIC3.42□□□□□ -1.86
USP25Q9UHP3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP25Q9UHP3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
USP25Q9UHP3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 Y_RNA.39-201ENST00000362620 98 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 SNORA68.1-201ENST00000364537 132 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 Y_RNA.557-201ENST00000384680 107 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 EIF4EP2-201ENST00000422816 654 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 RPL9P9-202ENST00000466501 579 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC133134.1-201ENST00000466800 359 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 CR383656.8-201ENST00000549046 145 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC004817.2-201ENST00000561794 651 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 MIR4503-201ENST00000582187 83 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 UBL5P2-201ENST00000583788 219 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 PRR13P7-201ENST00000605538 430 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 MIR3976-201ENST00000606807 139 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 SNORD58B-201ENST00000607313 66 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 AC005046.1-201ENST00000608515 625 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 MIR3529-201ENST00000637713 78 ntBASIC3.41□□□□□ -1.86
USP25Q9UHP3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
USP25Q9UHP3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
USP25Q9UHP3 AC138915.1-201ENST00000565427 1685 ntBASIC3.4□□□□□ -1.86
USP25Q9UHP3 AL161431.1-201ENST00000618966 4205 ntBASIC3.4□□□□□ -1.86
USP25Q9UHP3 Y_RNA.149-201ENST00000363558 117 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 Y_RNA.153-201ENST00000363615 91 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 AC012308.1-201ENST00000451232 178 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.4□□□□□ -1.87
USP25Q9UHP3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.4□□□□□ -1.87
USP25Q9UHP3 SNORA43.2-201ENST00000516652 128 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 COX6CP5-201ENST00000527162 228 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 MIR4273-201ENST00000582824 84 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
USP25Q9UHP3 MIR8076-201ENST00000611401 83 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 AL138825.1-201ENST00000618587 192 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.4□□□□□ -1.87
USP25Q9UHP3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP25Q9UHP3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP25Q9UHP3 RNY1P16-201ENST00000363063 111 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 RNA5SP267-201ENST00000364893 126 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 RNU6-574P-201ENST00000384265 107 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 RPS29P13-201ENST00000402041 169 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 Z92545.1-201ENST00000411782 234 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.39□□□□□ -1.87
USP25Q9UHP3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.39□□□□□ -1.87
USP25Q9UHP3 MED28P2-201ENST00000475771 317 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AC114801.2-201ENST00000503825 781 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.39□□□□□ -1.87
USP25Q9UHP3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 MIR5696-201ENST00000578474 85 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.39□□□□□ -1.87
USP25Q9UHP3 AC023043.3-201ENST00000593113 385 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AL158827.2-201ENST00000602494 330 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 AL691447.3-201ENST00000635020 330 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 MIR4272-201ENST00000635924 64 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 MIR7515-201ENST00000637837 67 ntBASIC3.39□□□□□ -1.87
USP25Q9UHP3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP25Q9UHP3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.38□□□□□ -1.87
USP25Q9UHP3 RNU6-99P-201ENST00000364721 107 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR634-201ENST00000385208 97 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 RNA5SP120-201ENST00000410900 112 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AL513477.1-202ENST00000417061 214 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.38□□□□□ -1.87
USP25Q9UHP3 NUP35P1-201ENST00000422734 947 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC096644.2-201ENST00000429278 159 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AL353997.1-201ENST00000432936 108 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC004383.1-201ENST00000438135 289 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 RPL39P40-201ENST00000445481 146 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MTATP8P1-201ENST00000467115 207 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC105758.1-201ENST00000506038 399 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 SNORA40.14-201ENST00000516543 86 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AP005902.1-201ENST00000521358 186 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC103996.1-201ENST00000555468 102 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 AC008269.2-201ENST00000561915 1105 ntBASIC3.38□□□□□ -1.87
USP25Q9UHP3 MIR5701-3-201ENST00000578890 82 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms