Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PRPS1P1-201ENST00000445305 876 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 MTCO3P9-201ENST00000506989 781 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 MTCYBP40-201ENST00000509390 1135 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AC079140.3-201ENST00000511111 550 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 RNU6-586P-201ENST00000517265 104 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AC069113.1-201ENST00000517763 267 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AP001893.2-201ENST00000526949 202 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AGGF1P4-201ENST00000568249 801 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 RSL24D1P11-201ENST00000591045 491 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AC245008.1-201ENST00000608123 476 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AP001596.2-201ENST00000608410 312 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 AL512598.1-201ENST00000610158 273 ntBASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NPC1L1Q9UHC9 SNORD116-2-201ENST00000384274 95 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 SNORD116-6-201ENST00000384711 96 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 POLHP1-201ENST00000411806 470 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC008267.5-201ENST00000424928 265 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 snoU13.14-201ENST00000459372 104 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL137161.1-201ENST00000532231 390 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC007229.1-201ENST00000590455 412 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 U4.7-201ENST00000638126 106 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 RNU6-212P-201ENST00000362642 104 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 Y_RNA.159-201ENST00000363674 87 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 SNORD116-1-201ENST00000384335 95 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 RNU6-1127P-201ENST00000384580 107 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 SCARNA18-201ENST00000459004 134 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 RNU6-377P-201ENST00000515965 102 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 PIGPP4-201ENST00000584447 307 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC004223.2-201ENST00000590309 544 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC091805.2-201ENST00000603848 235 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AL136363.2-201ENST00000604173 851 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC007684.1-201ENST00000609671 477 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 uc_338.5-201ENST00000611839 155 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC009509.4-201ENST00000619202 509 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC073534.2-201ENST00000620377 381 ntBASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.1□□□□□ -2.07
NPC1L1Q9UHC9 MTND4P23-201ENST00000447723 1363 ntBASIC2.09□□□□□ -2.07
NPC1L1Q9UHC9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 MIR517C-201ENST00000385103 95 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AIMP1P2-201ENST00000425294 312 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 RNU2-69P-201ENST00000516061 100 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC115990.1-201ENST00000526957 301 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AP003034.1-201ENST00000534621 422 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC023050.3-201ENST00000541142 333 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 MIR3611-201ENST00000584484 83 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC012507.3-201ENST00000603556 477 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 U2.17-201ENST00000611454 95 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 AC006026.1-201ENST00000444025 1803 ntBASIC2.09□□□□□ -2.08
NPC1L1Q9UHC9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 Y_RNA.1-201ENST00000352915 104 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 RNU6-552P-201ENST00000362869 119 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 RNU6-996P-201ENST00000365438 107 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 MIR29B2-201ENST00000385055 81 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 RNU6-903P-201ENST00000391270 109 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 Z83846.1-201ENST00000446798 265 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AL121594.1-201ENST00000475906 575 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC108078.1-201ENST00000508073 725 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 RN7SKP256-201ENST00000517201 314 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 MTCO3P23-201ENST00000561363 289 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC093249.1-201ENST00000567049 203 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 MIR4529-201ENST00000578110 78 ntBASIC2.08□□□□□ -2.08
NPC1L1Q9UHC9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms