Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
DUX4Q9UBX2 Y_RNA.201-201ENST00000364052 96 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 SNORD32B-201ENST00000364460 84 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 RNU6-74P-201ENST00000384235 107 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 MIR454-201ENST00000390180 115 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 C1DP2-201ENST00000418167 426 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 RPL31P35-201ENST00000431058 377 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 GPR143P-201ENST00000434155 205 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 USP9YP29-201ENST00000445112 563 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AL122001.1-201ENST00000457027 370 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC132942.1-201ENST00000486753 483 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC104564.1-201ENST00000493028 407 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC009646.1-201ENST00000510455 318 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC109479.2-201ENST00000517842 174 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC087441.2-201ENST00000529141 262 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AP005136.1-201ENST00000579765 429 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC008752.3-201ENST00000588113 712 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC040904.1-201ENST00000590850 223 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 AC064872.1-201ENST00000604823 1072 ntBASIC1.46□□□□□ -2.18
DUX4Q9UBX2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
DUX4Q9UBX2 Y_RNA.77-201ENST00000362962 107 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 RNU6-1097P-201ENST00000363586 107 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 SNORD48-201ENST00000364953 64 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 SNORD116-2-201ENST00000384274 95 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 RNU6-348P-201ENST00000384386 107 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 RNU6-160P-201ENST00000384591 107 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 SNORD116-6-201ENST00000384711 96 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AL358453.1-201ENST00000422522 250 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AL669831.1-202ENST00000428504 417 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 MTCO2P16-201ENST00000436962 677 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 GTF2IP13-201ENST00000438487 386 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC244505.5-201ENST00000443639 207 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC112492.4-201ENST00000456549 352 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 COPS8P3-201ENST00000526024 482 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC103987.3-201ENST00000582071 292 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC098848.2-201ENST00000588023 330 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AC119751.7-201ENST00000600494 245 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 VN1R107P-201ENST00000601784 209 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 AP000654.2-201ENST00000605633 586 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 uc_338.11-201ENST00000619132 160 ntBASIC1.45□□□□□ -2.18
DUX4Q9UBX2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
DUX4Q9UBX2 RNU6-527P-201ENST00000363425 104 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 Y_RNA.324-201ENST00000365165 102 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 Y_RNA.381-201ENST00000365666 102 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 SNORA75-201ENST00000384158 137 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 SNORD116-1-201ENST00000384335 95 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 Y_RNA.553-201ENST00000384670 102 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR544A-201ENST00000384855 91 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR934-201ENST00000401241 83 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 RNU4-46P-201ENST00000410818 138 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 BX295541.1-201ENST00000417774 250 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MTND1P27-201ENST00000451117 902 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC013470.1-201ENST00000453438 462 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 RNU6-956P-201ENST00000458868 103 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC107393.1-201ENST00000512403 346 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MTCO3P28-201ENST00000513351 515 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR4498-201ENST00000577599 66 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR4775-201ENST00000581168 75 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR3136-201ENST00000583498 78 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 BNIP3P16-201ENST00000589779 534 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 RSL24D1P11-201ENST00000591045 491 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 VN1R80P-201ENST00000597126 338 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AL034555.1-201ENST00000604816 211 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 AC087752.4-201ENST00000605911 462 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.44□□□□□ -2.18
DUX4Q9UBX2 U6.114-201ENST00000636407 96 ntBASIC1.44□□□□□ -2.18
DUX4Q9UBX2 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
DUX4Q9UBX2 RNU4-15P-201ENST00000362613 141 ntBASIC1.43□□□□□ -2.18
DUX4Q9UBX2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms