Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 AC010680.1-201ENST00000590024 3590 ntBASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PPARGC1AQ9UBK2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.105-201ENST00000363182 111 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD115-8-201ENST00000363856 82 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SNORD115-38-201ENST00000365037 82 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1093P-201ENST00000391194 107 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA48.7-201ENST00000391302 135 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 MIR548H3-201ENST00000408771 118 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1203P-201ENST00000410703 110 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RNU2-25P-201ENST00000411041 191 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RPS26P42-201ENST00000413485 326 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC017079.2-201ENST00000416102 485 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 HMGN2P31-201ENST00000432430 273 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 GPM6BP3-201ENST00000442797 145 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC006539.3-201ENST00000454258 129 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 U8.22-201ENST00000459141 133 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RPS4XP22-201ENST00000480755 780 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC115990.1-201ENST00000526957 301 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC007375.1-201ENST00000554513 578 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 MIR1254-2-201ENST00000579553 63 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 U3.45-201ENST00000607547 219 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-91P-201ENST00000607774 107 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SDR42E1P4-201ENST00000620894 481 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC022149.2-201ENST00000621061 203 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 U4.6-201ENST00000621618 127 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.6□□□□□ -1.83
PPARGC1AQ9UBK2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 U8.10-201ENST00000384260 133 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-748P-201ENST00000384648 107 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNA5SP213-201ENST00000391031 106 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RPS15AP7-201ENST00000439294 405 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AL161651.1-201ENST00000440882 223 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC016700.2-201ENST00000446011 156 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNU7-23P-201ENST00000459465 62 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 RNU6-570P-201ENST00000517051 105 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC022868.1-201ENST00000517767 391 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 MIR4300-201ENST00000581016 96 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 HMGN2P15-201ENST00000585707 270 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC024220.1-201ENST00000603675 484 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC011373.1-201ENST00000607270 237 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 AC240442.1-201ENST00000616055 283 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PPARGC1AQ9UBK2 MTND5P6-201ENST00000422338 1798 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC002543.1-201ENST00000299783 1954 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-222P-201ENST00000362438 107 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-1159P-201ENST00000362933 107 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.84-201ENST00000363011 104 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-1285P-201ENST00000363480 105 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU5F-3P-201ENST00000363767 117 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 SNORA20.1-201ENST00000364790 130 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.319-201ENST00000365138 92 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-1026P-201ENST00000384465 108 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-541P-201ENST00000384709 110 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 SNORA11-201ENST00000408789 128 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 CYCSP48-201ENST00000417124 323 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RPL21P38-201ENST00000418090 167 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 PTGES3P4-201ENST00000426243 356 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC244670.1-201ENST00000436879 112 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC096638.1-201ENST00000444678 216 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms