Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 COPS8P3-201ENST00000526024 482 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AP003392.2-201ENST00000527269 208 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AP003034.1-201ENST00000534621 422 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AC233702.2-202ENST00000562547 291 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 PIGPP4-201ENST00000584447 307 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AC007229.1-201ENST00000590455 412 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AC087683.1-201ENST00000591187 441 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 uc_338.34-201ENST00000617467 174 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 AL354685.2-201ENST00000448218 1447 ntBASIC1.64□□□□□ -2.15
CLCF1Q9UBD9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 RNU6-336P-201ENST00000364891 107 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 RNU6-611P-201ENST00000384276 104 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 HMGN2P39-201ENST00000398005 273 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL606923.1-201ENST00000406616 190 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL353193.1-201ENST00000421444 268 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 VN1R108P-201ENST00000431580 830 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL606489.2-201ENST00000433886 234 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL031274.1-201ENST00000450334 232 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AL137159.1-201ENST00000452808 512 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 MTCO2P18-201ENST00000457151 658 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 TPT1P7-201ENST00000458300 517 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC055731.1-201ENST00000474387 401 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC022447.4-201ENST00000504053 364 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 RNU5F-2P-201ENST00000516066 82 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC018630.3-201ENST00000542637 96 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC107304.1-201ENST00000604229 296 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 AC017083.3-201ENST00000609955 700 ntBASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLCF1Q9UBD9 ZNF72P-201ENST00000425869 1908 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RNU6-428P-201ENST00000362942 107 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RNU6-944P-201ENST00000364023 107 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RPS29P13-201ENST00000402041 169 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 MIR1294-201ENST00000408503 142 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RNU2-48P-201ENST00000410694 191 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AL663109.1-201ENST00000411498 844 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AL117339.3-201ENST00000418733 162 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 CBX3P6-201ENST00000430257 527 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RNA5SP233-201ENST00000459153 113 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AK3P2-201ENST00000507976 429 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 SNORA40.12-201ENST00000516329 111 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 RNU6-405P-201ENST00000516637 110 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 CYCSP27-201ENST00000527643 293 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AP005136.1-201ENST00000579765 429 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 MIR5583-1-201ENST00000580941 59 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 MIR3935-201ENST00000583472 104 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 MIR3136-201ENST00000583498 78 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC008749.1-201ENST00000597650 306 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AL356157.2-201ENST00000605122 111 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC073534.2-201ENST00000620377 381 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AL162373.1-201ENST00000620433 407 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 AC091932.3-201ENST00000624223 323 ntBASIC1.62□□□□□ -2.15
CLCF1Q9UBD9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 Y_RNA.51-201ENST00000362725 102 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RNU6-1159P-201ENST00000362933 107 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RNA5SP99-201ENST00000364020 114 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RNU6-1141P-201ENST00000364520 107 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 SNORA16B-201ENST00000364674 135 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RNU6-692P-201ENST00000384496 107 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 MIR17-201ENST00000385012 84 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 Y_RNA.597-201ENST00000410463 100 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AC245102.2-201ENST00000448956 180 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RN7SL274P-201ENST00000492268 272 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 MTND3P5-201ENST00000512798 333 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 OR11H5P-201ENST00000554039 926 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AC007375.1-201ENST00000554513 578 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 MTND1P15-201ENST00000579262 949 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms