Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 7SK.8-201ENST00000612110 250 ntBASIC0.42□□□□□ -2.34
CDK12Q9NYV4 7SK.11-201ENST00000615477 250 ntBASIC0.42□□□□□ -2.34
CDK12Q9NYV4 7SK.13-201ENST00000622040 250 ntBASIC0.42□□□□□ -2.34
CDK12Q9NYV4 AC092656.1-203ENST00000624134 423 ntBASIC0.42□□□□□ -2.34
CDK12Q9NYV4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.42□□□□□ -2.34
CDK12Q9NYV4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
CDK12Q9NYV4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CDK12Q9NYV4 Y_RNA.332-201ENST00000365271 113 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 RNU6-1122P-201ENST00000384449 107 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 Y_RNA.571-201ENST00000384753 98 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 MIR19B1-201ENST00000384829 87 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL359634.1-202ENST00000404721 284 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC079140.3-201ENST00000511111 550 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 RNU5A-4P-201ENST00000516588 111 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC078795.2-201ENST00000602835 1252 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL365434.2-201ENST00000607979 234 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 RMST_4.1-201ENST00000616886 107 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC010615.1-201ENST00000594254 1764 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 RNU6-792P-201ENST00000363490 107 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 RNU6-487P-201ENST00000365430 104 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 MED28P2-201ENST00000475771 317 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC092325.1-201ENST00000566449 554 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC022432.1-201ENST00000595739 310 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC004987.4-201ENST00000603383 338 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AL138726.1-201ENST00000614873 333 ntBASIC0.41□□□□□ -2.34
CDK12Q9NYV4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.4□□□□□ -2.34
CDK12Q9NYV4 RNU5B-1-201ENST00000363286 116 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 RNU6-701P-201ENST00000384059 107 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 RNU6-45P-201ENST00000384471 107 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 MIR548B-201ENST00000385247 97 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 AC016831.2-201ENST00000417179 352 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.4□□□□□ -2.35
CDK12Q9NYV4 AL606517.1-201ENST00000446914 387 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.4□□□□□ -2.35
CDK12Q9NYV4 RNU6-197P-201ENST00000516680 100 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 SLC2A13P1-201ENST00000531560 322 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 AC060771.1-201ENST00000582031 164 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 BNIP3P16-201ENST00000589779 534 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 RNU6-87P-201ENST00000607561 108 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 AL159153.1-201ENST00000619688 317 ntBASIC0.4□□□□□ -2.35
CDK12Q9NYV4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 SNORD114-24-201ENST00000365029 72 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 MIR301A-201ENST00000385261 86 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 RNU6-278P-201ENST00000390945 109 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 RPS15AP10-201ENST00000432472 382 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 AC099677.2-201ENST00000436385 175 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 AC005094.1-201ENST00000440420 368 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 SEPT14P24-201ENST00000447236 180 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 SNRPGP12-201ENST00000449481 213 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 RNU7-59P-201ENST00000459101 61 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 RNA5SP503-201ENST00000517047 117 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 MIR1273C-201ENST00000578669 77 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.39□□□□□ -2.35
CDK12Q9NYV4 VN1R82P-201ENST00000601481 356 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 RPL21P136-201ENST00000605378 396 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.39□□□□□ -2.35
CDK12Q9NYV4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 RNU6-1176P-201ENST00000390955 107 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 MIR1305-201ENST00000408300 86 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 snoU109.2-201ENST00000459316 135 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC104563.1-201ENST00000476147 376 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC074344.1-201ENST00000512823 224 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.38□□□□□ -2.35
CDK12Q9NYV4 AC022022.2-201ENST00000602989 360 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 BNIP3P31-201ENST00000604515 566 ntBASIC0.38□□□□□ -2.35
CDK12Q9NYV4 RNU6-744P-201ENST00000365557 107 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 RNU6-1316P-201ENST00000384242 108 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 RNA5SP266-201ENST00000410273 108 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 AC123900.1-201ENST00000420390 96 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.37□□□□□ -2.35
CDK12Q9NYV4 AC002429.1-201ENST00000437672 148 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 GTF2IP13-201ENST00000438487 386 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.37□□□□□ -2.35
CDK12Q9NYV4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CDK12Q9NYV4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
CDK12Q9NYV4 RNA5SP481-201ENST00000516814 122 ntBASIC0.37□□□□□ -2.35
CDK12Q9NYV4 RNA5SP437-201ENST00000517249 129 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms