Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC100830.2-201ENST00000581636 240 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AL391813.1-201ENST00000603098 260 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AC006023.1-201ENST00000603944 259 ntBASIC2.23□□□□□ -2.05
NDE1Q9NXR1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NDE1Q9NXR1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU6-692P-201ENST00000384496 107 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 MIR548K-201ENST00000408406 116 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RN7SKP284-201ENST00000411002 343 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU6-293P-201ENST00000411259 106 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC096649.2-201ENST00000416186 393 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 NUP35P1-201ENST00000422734 947 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 Z82205.1-201ENST00000428456 297 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 SNAP23P1-201ENST00000433229 246 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC105272.1-201ENST00000438604 198 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC013470.1-201ENST00000453438 462 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC107626.1-201ENST00000471084 183 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RN7SL429P-201ENST00000479090 223 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RN7SL489P-201ENST00000486185 223 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RN7SL327P-201ENST00000488659 223 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 SNORD19.2-201ENST00000516978 73 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 SNORA31.23-201ENST00000517219 133 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC093027.1-201ENST00000546698 429 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AL022345.1-201ENST00000607292 135 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AL132765.2-201ENST00000610812 351 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 RN7SL853P-201ENST00000617250 223 ntBASIC2.22□□□□□ -2.05
NDE1Q9NXR1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.22□□□□□ -2.05
NDE1Q9NXR1 AC069528.2-201ENST00000624849 1991 ntBASIC2.21□□□□□ -2.05
NDE1Q9NXR1 Y_RNA.263-201ENST00000364659 114 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.339-201ENST00000365325 102 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AL030996.1-201ENST00000411430 235 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC074117.2-201ENST00000417130 397 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AL591043.1-201ENST00000432461 424 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC012308.1-201ENST00000451232 178 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 SNRPGP7-201ENST00000469016 106 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AP001025.1-201ENST00000486139 332 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.691-201ENST00000516611 103 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC109479.2-201ENST00000517842 174 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 COX6CP5-201ENST00000527162 228 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 RAB11AP2-201ENST00000545905 639 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 CR383656.8-201ENST00000549046 145 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 LARP7P1-201ENST00000605576 316 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 MIR3976-201ENST00000606807 139 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 MIR6128-201ENST00000615528 109 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC009233.1-201ENST00000616477 371 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AL359757.2-201ENST00000624309 274 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 AC241585.2-209ENST00000638217 143 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 MTND4P23-201ENST00000447723 1363 ntBASIC2.21□□□□□ -2.06
NDE1Q9NXR1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.21□□□□□ -2.06
NDE1Q9NXR1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 Y_RNA.474-201ENST00000384341 102 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 SNORA44-201ENST00000384584 132 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 MIR517A-201ENST00000385001 87 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AL139396.1-201ENST00000421137 167 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 MTND3P9-201ENST00000429526 346 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 Z98742.2-201ENST00000431564 187 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 RPS15AP10-201ENST00000432472 382 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC243964.1-201ENST00000441814 261 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC107399.1-201ENST00000451226 265 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC006026.2-201ENST00000457376 180 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 RPL30P12-201ENST00000474666 353 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 RNU6-277P-201ENST00000516272 106 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.2□□□□□ -2.06
NDE1Q9NXR1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 POLR3GP2-201ENST00000588366 668 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 AL161423.1-201ENST00000613700 262 ntBASIC2.2□□□□□ -2.06
NDE1Q9NXR1 MIR1302-1-201ENST00000637932 143 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms