Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MIR3923-201ENST00000579521 83 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC100830.2-201ENST00000581636 240 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC005034.5-201ENST00000604219 466 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC006386.2-201ENST00000624491 75 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC012005.1-201ENST00000624575 75 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 FER-210ENST00000628534 558 ntTSL 5 BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 MIR1321-201ENST00000637766 79 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 AC233981.2-201ENST00000611524 1614 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 OR4G1P-203ENST00000641984 1631 ntBASIC2.17□□□□□ -2.06
CHCHD3Q9NX63 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 RNU6-859P-201ENST00000362728 107 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.99-201ENST00000363138 105 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 Y_RNA.378-201ENST00000365652 113 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AL590135.1-201ENST00000422215 156 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 RPL31P63-201ENST00000422565 375 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC019205.3-201ENST00000424573 156 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC016700.2-201ENST00000446011 156 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC015911.1-201ENST00000495111 156 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC008628.2-201ENST00000502605 298 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 RNU6-323P-201ENST00000521915 107 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC233702.2-202ENST00000562547 291 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 MIR4513-201ENST00000581077 86 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 MIR3935-201ENST00000583472 104 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AL357078.3-201ENST00000607528 618 ntBASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
CHCHD3Q9NX63 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 SNORA80A-201ENST00000363922 136 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 U3.12-201ENST00000364498 214 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU6-1329P-201ENST00000365664 107 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU6-128P-201ENST00000383976 107 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 MIR27B-201ENST00000385129 97 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AL357139.1-201ENST00000407792 426 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC145146.1-201ENST00000496370 254 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AL118558.2-201ENST00000556294 238 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 MIR5692C1-201ENST00000585309 91 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 RNU6-89P-201ENST00000606519 100 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC067747.1-201ENST00000608026 250 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 U4.5-201ENST00000617137 123 ntBASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
CHCHD3Q9NX63 MTND4P23-201ENST00000447723 1363 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 RNU6-227P-201ENST00000362865 103 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 MIR518A2-201ENST00000384966 87 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 RNU6-908P-201ENST00000410160 94 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 RNU4-26P-201ENST00000410270 107 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 SNRPEP10-201ENST00000420249 274 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 MTND2P29-201ENST00000438595 412 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AL135938.1-201ENST00000443141 297 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 PRELID3BP1-201ENST00000457142 540 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 PTP4A1P4-201ENST00000512479 322 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AP005597.4-201ENST00000526762 229 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC109635.3-201ENST00000529536 185 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 SCOCP1-201ENST00000554676 349 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 CYP4A27P-201ENST00000567218 190 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC092954.2-201ENST00000609103 430 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 AC005520.5-201ENST00000613926 164 ntBASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHCHD3Q9NX63 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.9-201ENST00000362354 101 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNY3P3-201ENST00000363816 102 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.372-201ENST00000365599 102 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 MIR196B-201ENST00000384852 84 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms