Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC079448.1-201ENST00000449377 373 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 HMGN2P18-201ENST00000450680 270 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 ART2BP-201ENST00000453501 499 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RNU7-125P-201ENST00000458760 62 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC132942.1-201ENST00000486753 483 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RNU6-410P-201ENST00000517006 107 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 MIR3682-201ENST00000581338 84 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AL034555.1-201ENST00000604816 211 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC011155.2-201ENST00000623202 216 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 AC008993.2-201ENST00000631744 806 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNU4-15P-201ENST00000362613 141 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNY1P10-201ENST00000363268 113 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 SNORD114-6-201ENST00000364393 72 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNU6-715P-201ENST00000365204 103 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 Y_RNA.367-201ENST00000365544 101 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNU4-62P-201ENST00000410125 130 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNA5SP100-201ENST00000410903 110 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RNA5SP59-201ENST00000410922 110 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 HIGD1AP15-201ENST00000416198 280 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 Z99497.1-201ENST00000421282 135 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TREX1Q9NSU2 MTND4P20-201ENST00000424125 869 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC092473.1-201ENST00000441098 221 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC243964.1-201ENST00000441814 261 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 MTCYBP1-201ENST00000454315 1119 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AL162395.1-201ENST00000457882 422 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 RN7SKP265-201ENST00000516448 223 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.3□□□□□ -2.2
TREX1Q9NSU2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.3□□□□□ -2.2
TREX1Q9NSU2 SUB1P3-201ENST00000564581 315 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AL590229.1-201ENST00000603497 542 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC107304.1-201ENST00000604229 296 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 Z84480.1-201ENST00000605131 311 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC123912.5-201ENST00000605470 343 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC092354.1-201ENST00000606057 376 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 AC120349.3-201ENST00000624377 529 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 SNORD98-201ENST00000636377 67 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.3□□□□□ -2.2
TREX1Q9NSU2 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 RNU6-1285P-201ENST00000363480 105 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 RNU6-1303P-201ENST00000364841 107 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 RNU6-439P-201ENST00000384188 106 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC108667.1-201ENST00000428618 249 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 GPR143P-201ENST00000434155 205 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC079781.2-201ENST00000446424 169 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 MIR3169-201ENST00000578032 83 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AC018889.1-201ENST00000605372 397 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 MIR98-201ENST00000606724 119 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 AF246928.1-201ENST00000623768 87 ntBASIC1.29□□□□□ -2.2
TREX1Q9NSU2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TREX1Q9NSU2 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 SNORA72.3-201ENST00000365074 132 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNU6-26P-201ENST00000383985 107 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNU1-78P-201ENST00000391248 165 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AL590135.1-201ENST00000422215 156 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC013410.2-201ENST00000422627 201 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC019205.3-201ENST00000424573 156 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 MTCO3P46-201ENST00000425787 232 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC016700.2-201ENST00000446011 156 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 SNRPFP4-201ENST00000456366 242 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNU6-333P-201ENST00000459117 107 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AL163540.1-201ENST00000485382 386 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms