Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MTND4P14-201ENST00000435799 1354 ntBASIC2.08□□□□□ -2.08
HPS4Q9NQG7 RNU6-996P-201ENST00000365438 107 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 SNORA25B-201ENST00000365507 128 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 Y_RNA.372-201ENST00000365599 102 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 SNORD56-201ENST00000413522 71 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 EDDM3CP-201ENST00000415977 425 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 RPL39P29-201ENST00000447779 157 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 RNU6-377P-201ENST00000515965 102 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 RNU6-506P-201ENST00000516553 94 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 SNORA25.17-201ENST00000517184 124 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AL137161.1-201ENST00000532231 390 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 HIF1AP1-201ENST00000553642 175 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC110588.1-201ENST00000559699 137 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 MTCO3P23-201ENST00000561363 289 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC123912.5-201ENST00000605470 343 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 AC090517.3-201ENST00000625170 141 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
HPS4Q9NQG7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HPS4Q9NQG7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RNU6-105P-201ENST00000363909 104 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RNU6-1215P-201ENST00000384441 102 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 MIR583-201ENST00000384846 75 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 MIR544A-201ENST00000384855 91 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RNA5SP213-201ENST00000391031 106 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC027124.2-201ENST00000428249 105 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AL606489.2-201ENST00000433886 234 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RPL7P54-201ENST00000438336 674 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC019235.1-201ENST00000503847 207 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 SNORA4.4-201ENST00000515921 135 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AP001893.2-201ENST00000526949 202 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC012507.3-201ENST00000603556 477 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC002044.1-201ENST00000606707 158 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC017083.3-201ENST00000609955 700 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
HPS4Q9NQG7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.06□□□□□ -2.08
HPS4Q9NQG7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 Y_RNA.399-201ENST00000383955 105 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 Y_RNA.554-201ENST00000384672 102 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AL353689.1-201ENST00000438895 199 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC073415.1-201ENST00000449240 153 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AL353752.1-201ENST00000454946 260 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 SRRM1P2-201ENST00000464531 1192 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 RPL30P1-201ENST00000488676 339 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC009646.1-201ENST00000510455 318 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 RNU6-314P-201ENST00000516574 104 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 Y_RNA.704-201ENST00000516851 102 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC109479.2-201ENST00000517842 174 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 MIR5583-1-201ENST00000580941 59 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AC068790.6-201ENST00000602558 258 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AL670379.2-201ENST00000604983 252 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AP001330.5-201ENST00000607176 411 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HPS4Q9NQG7 AL354950.2-201ENST00000617939 290 ntBASIC2.05□□□□□ -2.08
HPS4Q9NQG7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC019129.1-201ENST00000403786 261 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 RNU7-180P-201ENST00000459240 63 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC079140.5-201ENST00000507882 310 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 SNORA40.12-201ENST00000516329 111 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 261.3 ms