Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 MIR10B-201ENST00000385011 110 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 RNU6-1025P-201ENST00000410629 104 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 RNU6-1054P-201ENST00000411293 104 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 MTCO1P21-201ENST00000416634 589 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 RNA5SP255-201ENST00000516370 107 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC023050.2-201ENST00000544968 387 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC091489.2-201ENST00000566263 604 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 MIR4293-201ENST00000584305 78 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 AC068787.1-201ENST00000623908 691 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 SNORD32B-201ENST00000364460 84 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 RNU6-331P-201ENST00000384724 107 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AC073614.1-201ENST00000438690 650 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 MTND4P25-201ENST00000441039 533 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AC010468.3-201ENST00000508225 458 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AC024589.1-201ENST00000512207 263 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 SNORA31.2-201ENST00000516019 134 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AL442163.3-201ENST00000554110 156 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AL157871.3-201ENST00000557231 293 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AC025678.1-201ENST00000567861 338 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 ZNF92P2-201ENST00000600543 1059 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AC068790.6-201ENST00000602558 258 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 AL353765.1-201ENST00000605514 183 ntBASIC0.39□□□□□ -2.35
MRPL40Q9NQ50 SNORD3E-201ENST00000362899 217 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 RNU2-42P-201ENST00000410697 113 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 MTND2P33-201ENST00000506452 1031 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 SNORD79.1-201ENST00000516069 84 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 MTND1P36-201ENST00000522384 936 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 MIR1273C-201ENST00000578669 77 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 AC004987.4-201ENST00000603383 338 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 MIR3976-201ENST00000606807 139 ntBASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.38□□□□□ -2.35
MRPL40Q9NQ50 Y_RNA.33-201ENST00000362591 102 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RNU5B-1-201ENST00000363286 116 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RNA5SP259-201ENST00000365541 109 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RNU6-72P-201ENST00000384285 79 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 MIR19A-201ENST00000384878 82 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RN7SKP200-201ENST00000410564 320 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RNU2-70P-201ENST00000410718 179 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 COX6CP10-201ENST00000416832 224 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 ARL5AP1-201ENST00000418991 388 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 AL365338.1-201ENST00000422282 858 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 MTCYBP5-201ENST00000423752 1135 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 AC079776.3-201ENST00000450665 370 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 Y_RNA.681-201ENST00000516445 113 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 RNU6-64P-201ENST00000517119 105 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 AL451064.1-201ENST00000607718 471 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 Z69720.2-201ENST00000624755 279 ntBASIC0.37□□□□□ -2.35
MRPL40Q9NQ50 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 MTCO3P18-201ENST00000440206 761 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 GAPDHP17-201ENST00000449858 1001 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 MTCO3P7-201ENST00000510008 774 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 HMGN1P30-201ENST00000589286 268 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 AL136363.2-201ENST00000604173 851 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 AL158163.2-201ENST00000619110 700 ntBASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.36□□□□□ -2.35
MRPL40Q9NQ50 AC023934.1-201ENST00000574529 2389 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 RNU6-395P-201ENST00000365662 106 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 MIR942-201ENST00000401111 86 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 CETN4P-201ENST00000432407 469 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 MTND1P3-201ENST00000484956 952 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 MIR4709-201ENST00000577272 72 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 MIR4514-201ENST00000581410 57 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 AC091135.1-201ENST00000585943 307 ntBASIC0.35□□□□□ -2.35
MRPL40Q9NQ50 RNU1-96P-201ENST00000364163 162 ntBASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 SNORD116-20-201ENST00000384529 92 ntBASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 ELOCP9-201ENST00000418624 239 ntBASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 AC006026.2-201ENST00000457376 180 ntBASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 PCMTD1P7-201ENST00000634506 357 ntBASIC0.34□□□□□ -2.36
MRPL40Q9NQ50 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 RNU6-862P-201ENST00000362804 105 ntBASIC0.33□□□□□ -2.36
MRPL40Q9NQ50 Y_RNA.68-201ENST00000362881 102 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms