Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-1013P-201ENST00000384180 107 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 SNORA70B-201ENST00000384210 135 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 SNORA67.3-201ENST00000384366 140 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 RPL21P111-201ENST00000418453 477 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 DPH3P2-201ENST00000422618 250 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AL645568.3-201ENST00000433683 316 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC096638.1-201ENST00000444678 216 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC022447.4-201ENST00000504053 364 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC087241.2-201ENST00000535801 324 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC023824.2-201ENST00000566185 400 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 MIR5571-201ENST00000577998 113 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 MIR3942-201ENST00000585264 109 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP44Q9H0E7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU6-827P-201ENST00000365553 106 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 SNORD73A-201ENST00000386062 65 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 MTATP6P23-201ENST00000440153 476 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 RPL39P29-201ENST00000447779 157 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC008526.1-201ENST00000509149 338 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU4-49P-201ENST00000516080 140 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC134698.4-201ENST00000523451 826 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AP005597.4-201ENST00000526762 229 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC025423.5-201ENST00000550230 219 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 MIR548S-201ENST00000581352 82 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC011712.1-201ENST00000588959 234 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AC008121.3-201ENST00000618726 433 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 AL159153.1-201ENST00000619688 317 ntBASIC2.71□□□□□ -1.98
USP44Q9H0E7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USP44Q9H0E7 RNU6-655P-201ENST00000362858 107 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 MIR186-201ENST00000384988 86 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 MIR218-1-201ENST00000384999 110 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 RNU6-220P-201ENST00000390919 107 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 SNORA48.3-201ENST00000391081 134 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 CBX3P9-201ENST00000402326 552 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AL133475.1-201ENST00000404414 305 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 RN7SKP32-201ENST00000410167 303 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 RNU2-63P-201ENST00000410792 194 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 RNU6-293P-201ENST00000411259 106 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 VN1R36P-201ENST00000414936 291 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC078809.1-201ENST00000427601 140 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 IFNA20P-201ENST00000436840 528 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC243964.1-201ENST00000441814 261 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AL353705.4-201ENST00000449661 238 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 PMCHL2-203ENST00000457791 237 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 U8.21-201ENST00000459536 136 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC104435.1-201ENST00000483483 166 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 RNU6-864P-201ENST00000516256 108 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 RN7SKP256-201ENST00000517201 314 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 MIR4648-201ENST00000580107 72 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 MIR3672-201ENST00000584290 82 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC091135.1-201ENST00000585943 307 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.7□□□□□ -1.98
USP44Q9H0E7 AC093913.1-201ENST00000614178 329 ntBASIC2.7□□□□□ -1.98
USP44Q9H0E7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
USP44Q9H0E7 CBX3P1-201ENST00000325243 554 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 U8.2-201ENST00000363156 134 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 SNORA72.1-201ENST00000363485 129 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP44Q9H0E7 RNU6-767P-201ENST00000384132 107 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 RNU6-510P-201ENST00000391239 108 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP44Q9H0E7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP44Q9H0E7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP44Q9H0E7 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 AP000275.1-201ENST00000411943 390 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 MTND4LP11-201ENST00000422184 280 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.69□□□□□ -1.98
USP44Q9H0E7 MTCO3P46-201ENST00000425787 232 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP44Q9H0E7 RNU6-329P-201ENST00000459618 107 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 RPL30P1-201ENST00000488676 339 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 HMGN1P12-201ENST00000499125 195 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 RNU2-53P-201ENST00000516257 147 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 RNU6-1332P-201ENST00000516666 104 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms