Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-827P-201ENST00000365553 106 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 RNU6-214P-201ENST00000384130 107 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MIR544A-201ENST00000384855 91 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 SNORA40.18-201ENST00000391200 128 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MIR450B-201ENST00000401182 78 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MIR1277-201ENST00000408536 78 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 RNA5SP390-201ENST00000410191 113 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 RPL23AP63-201ENST00000498752 471 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 SMURF2P1-201ENST00000514992 481 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MTND1P5-201ENST00000517906 940 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 AC025423.5-201ENST00000550230 219 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF541Q9H0D2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MIR337-201ENST00000362281 93 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 RNU6-428P-201ENST00000362942 107 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 RNU6-457P-201ENST00000363999 107 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 RNU6-534P-201ENST00000364877 106 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MIR499A-201ENST00000384903 122 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MRPS10P2-201ENST00000431226 381 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC007547.1-201ENST00000462177 490 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC087884.1-201ENST00000469738 328 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MTCYBP40-201ENST00000509390 1135 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 RNU6-1332P-201ENST00000516666 104 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 SNORA31.23-201ENST00000517219 133 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC103996.1-201ENST00000555468 102 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AP003465.2-201ENST00000602571 373 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 MIR8070-201ENST00000616510 88 ntBASIC2.51□□□□□ -2.01
ZNF541Q9H0D2 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 RNU6-1252P-201ENST00000363054 104 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 U3.13-201ENST00000364804 214 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 MIR489-201ENST00000384923 84 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 MIR514A2-201ENST00000385131 88 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 MIR514A3-201ENST00000385132 88 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 RPL30P4-201ENST00000429309 333 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 RPS15AP10-201ENST00000432472 382 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 RPL39P29-201ENST00000447779 157 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC117503.1-201ENST00000472241 394 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC090616.3-201ENST00000582184 217 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AL121917.1-203ENST00000605534 577 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 uc_338.15-201ENST00000615470 191 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF541Q9H0D2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 MIR378A-201ENST00000362177 66 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 SNORA38-201ENST00000363946 132 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 SNORA32.2-201ENST00000384049 122 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 SNORD73A-201ENST00000386062 65 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AL513475.1-201ENST00000406602 315 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 NFU1P2-201ENST00000448700 469 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC008628.2-201ENST00000502605 298 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC079598.5-201ENST00000547460 117 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 MIR5692C1-201ENST00000585309 91 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AC002553.4-201ENST00000616896 331 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 AL449363.1-201ENST00000617815 186 ntBASIC2.49□□□□□ -2.01
ZNF541Q9H0D2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 SNORD113-7-201ENST00000363762 77 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 Y_RNA.256-201ENST00000364594 104 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 U6atac.2-201ENST00000408644 118 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms