Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MTND4P33-201ENST00000556706 766 ntBASIC0.84□□□□□ -2.27
NKX6-2Q9C056 AC090888.2-201ENST00000559765 1144 ntBASIC0.84□□□□□ -2.27
NKX6-2Q9C056 AC015688.6-201ENST00000577737 104 ntBASIC0.84□□□□□ -2.27
NKX6-2Q9C056 HMGN1P30-201ENST00000589286 268 ntBASIC0.84□□□□□ -2.27
NKX6-2Q9C056 RNU6-501P-201ENST00000364072 100 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 RNU6-1303P-201ENST00000364841 107 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 RNU6-336P-201ENST00000364891 107 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 Y_RNA.576-201ENST00000384781 102 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 MTCYBP2-201ENST00000407745 171 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL161935.2-201ENST00000414627 60 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL008987.1-201ENST00000415528 237 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 MTCO2P23-201ENST00000425216 680 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AC010975.2-201ENST00000427781 588 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL365184.2-201ENST00000431139 435 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 FTH1P12-201ENST00000432137 551 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AC244670.1-201ENST00000436879 112 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 GAPDHP17-201ENST00000449858 1001 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 SNORD13-201ENST00000459299 104 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 RNU6-377P-201ENST00000515965 102 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 RNU6-1098P-201ENST00000516772 96 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AC022616.3-201ENST00000523940 148 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL451064.1-201ENST00000607718 471 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AL365434.2-201ENST00000607979 234 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 AC010608.3-201ENST00000625048 527 ntBASIC0.83□□□□□ -2.28
NKX6-2Q9C056 SNORD33-201ENST00000362761 85 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU6-428P-201ENST00000362942 107 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU1-96P-201ENST00000364163 162 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU6-1141P-201ENST00000364520 107 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 Y_RNA.255-201ENST00000364581 97 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU4-56P-201ENST00000364700 142 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU6-45P-201ENST00000384471 107 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU6-1065P-201ENST00000384513 106 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 MIR620-201ENST00000385232 95 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNA5SP201-201ENST00000410316 124 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 EIF1P1-201ENST00000421436 341 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.82□□□□□ -2.28
NKX6-2Q9C056 MTATP6P16-201ENST00000434543 526 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 MTND1P18-201ENST00000448191 573 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC132479.1-201ENST00000449160 144 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU7-14P-201ENST00000459331 62 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC010531.2-201ENST00000465012 153 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC116337.1-201ENST00000509680 687 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC074344.1-201ENST00000512823 224 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 SCARNA24.1-201ENST00000516465 137 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 RNU5F-4P-201ENST00000516581 114 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 CENPUP1-201ENST00000526649 1202 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.82□□□□□ -2.28
NKX6-2Q9C056 PCMTD1P2-201ENST00000565017 355 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 MIR4421-201ENST00000578133 69 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AP005136.1-201ENST00000579765 429 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC004492.1-201ENST00000607036 742 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC136475.10-201ENST00000620253 385 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC009033.1-201ENST00000624279 431 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 AC241585.2-209ENST00000638217 143 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 MTND4P9-201ENST00000507819 1346 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.82□□□□□ -2.28
NKX6-2Q9C056 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 MTND5P35-201ENST00000557537 1720 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RNU6-1019P-201ENST00000364424 107 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 Y_RNA.324-201ENST00000365165 102 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RNU6-387P-201ENST00000411331 105 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RPL31P3-201ENST00000458430 332 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AL163973.1-201ENST00000484753 577 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC116562.3-201ENST00000506136 177 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC079140.3-201ENST00000511111 550 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RNA5SP481-201ENST00000516814 122 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC068587.5-201ENST00000528506 175 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC084364.2-201ENST00000546924 395 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 HSPE1P4-201ENST00000550617 308 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-2Q9C056 MIR4999-201ENST00000585029 91 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 BNIP3P8-201ENST00000597863 560 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AL512598.1-201ENST00000610158 273 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 AC009159.2-201ENST00000617603 606 ntBASIC0.81□□□□□ -2.28
NKX6-2Q9C056 RNU5F-7P-201ENST00000363696 115 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 U3.9-201ENST00000363823 204 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 SNORA63D-201ENST00000364359 132 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 RNU6-1026P-201ENST00000384465 108 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 Y_RNA.500-201ENST00000384466 111 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 RNU6-1176P-201ENST00000390955 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms