Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL590556.1-201ENST00000423231 483 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 USP9YP11-201ENST00000427537 717 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC119751.4-201ENST00000507498 357 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC067942.3-201ENST00000512025 362 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 MTND3P13-201ENST00000574391 343 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.78□□□□□ -2.28
TRIM4Q9C037 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 BNIP3P26-201ENST00000600827 554 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 BX284668.6-201ENST00000606899 438 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC245297.2-201ENST00000610119 565 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRIM4Q9C037 MIR412-201ENST00000362142 91 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 Y_RNA.274-201ENST00000364714 101 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 SNORA25-201ENST00000384384 134 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 RNU6-16P-201ENST00000384385 107 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 MIR10A-201ENST00000385043 110 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 RNU2-7P-201ENST00000410794 178 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 TIMM9P1-201ENST00000436122 256 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 LARP1BP3-201ENST00000437229 869 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.77□□□□□ -2.29
TRIM4Q9C037 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRIM4Q9C037 AL163195.1-201ENST00000496941 348 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 MTND2P33-201ENST00000506452 1031 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 RNU5A-4P-201ENST00000516588 111 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC087894.1-201ENST00000538359 518 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.77□□□□□ -2.29
TRIM4Q9C037 VN1R82P-201ENST00000601481 356 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AL590229.1-201ENST00000603497 542 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC008945.2-201ENST00000606056 604 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 AC024940.5-201ENST00000622889 474 ntBASIC0.77□□□□□ -2.29
TRIM4Q9C037 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRIM4Q9C037 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC092104.1-201ENST00000497346 1441 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 MIR340-201ENST00000362125 95 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 SNORD56.1-201ENST00000362913 68 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 TXNL1P1-201ENST00000429528 554 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 MTND1P30-201ENST00000441241 901 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 AL122001.1-201ENST00000457027 370 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC134050.1-201ENST00000495088 933 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 Y_RNA.687-201ENST00000516558 91 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 SNORA43.2-201ENST00000516652 128 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 RNU11-2P-201ENST00000516898 142 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.76□□□□□ -2.29
TRIM4Q9C037 AL022154.1-201ENST00000604698 785 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AL365434.2-201ENST00000607979 234 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
TRIM4Q9C037 AC010615.1-201ENST00000594254 1764 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRIM4Q9C037 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRIM4Q9C037 RNU6-190P-201ENST00000384154 102 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRIM4Q9C037 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 BTF3L4P1-201ENST00000413813 468 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AC123900.1-201ENST00000420390 96 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.75□□□□□ -2.29
TRIM4Q9C037 SNX2P2-201ENST00000424553 323 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.75□□□□□ -2.29
TRIM4Q9C037 AL117351.1-201ENST00000438864 766 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 NDUFB1P2-201ENST00000449477 176 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 snoU13.30-201ENST00000458951 104 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 RN7SKP88-201ENST00000516847 250 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 SUMO2P18-201ENST00000518873 252 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 BNIP3P6-201ENST00000549284 499 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AC091135.1-201ENST00000585943 307 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AL136363.2-201ENST00000604173 851 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AL022345.2-201ENST00000606307 135 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 AC131235.4-201ENST00000609288 620 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 7SK.8-201ENST00000612110 250 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
TRIM4Q9C037 7SK.11-201ENST00000615477 250 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 7SK.13-201ENST00000622040 250 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 SCARNA4-202ENST00000625402 129 ntBASIC0.75□□□□□ -2.29
TRIM4Q9C037 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TRIM4Q9C037 RNU6-105P-201ENST00000363909 104 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 SNORD32B-201ENST00000364460 84 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 Y_RNA.280-201ENST00000364765 112 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 RAP1BP3-201ENST00000407180 549 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 MTND5P15-201ENST00000434246 349 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC099677.2-201ENST00000436385 175 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 HSPE1P13-201ENST00000451143 297 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 388.1 ms