Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR6513-201ENST00000621188 64 ntBASIC1.03□□□□□ -2.24
UPF3BQ9BZI7 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 RNU6-723P-201ENST00000383973 107 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 RAP1BP3-201ENST00000407180 549 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AC092809.3-201ENST00000415453 231 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 HSPE1P9-201ENST00000440046 311 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AC022447.4-201ENST00000504053 364 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AC116353.3-201ENST00000511215 249 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 Y_RNA.687-201ENST00000516558 91 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 Y_RNA.689-201ENST00000516589 107 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 MIR5094-201ENST00000578766 85 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 MIR3937-201ENST00000580135 106 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AP003465.2-201ENST00000602571 373 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 RMST_7.1-201ENST00000621935 268 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 AC120349.3-201ENST00000624377 529 ntBASIC1.02□□□□□ -2.25
UPF3BQ9BZI7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 RPL21P111-201ENST00000418453 477 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC097473.1-201ENST00000508142 408 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC079140.3-201ENST00000511111 550 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC112198.4-201ENST00000515450 351 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 BNIP3P31-201ENST00000604515 566 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC091965.4-201ENST00000607691 587 ntBASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.01□□□□□ -2.25
UPF3BQ9BZI7 AC100821.1-201ENST00000523153 2479 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UPF3BQ9BZI7 Y_RNA.472-201ENST00000384322 102 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 RPL23AP30-201ENST00000432419 501 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC007969.2-201ENST00000441891 191 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 RNA5SP395-201ENST00000516567 118 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 SUMO2P18-201ENST00000518873 252 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC011979.2-201ENST00000527568 352 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC136932.1-201ENST00000574771 208 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1□□□□□ -2.25
UPF3BQ9BZI7 NIFKP6-201ENST00000598115 845 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 AL592221.1-201ENST00000605266 382 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 MIR8065-201ENST00000620577 100 ntBASIC1□□□□□ -2.25
UPF3BQ9BZI7 SNORD56.1-201ENST00000362913 68 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RNU6-968P-201ENST00000384076 107 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 Y_RNA.465-201ENST00000384293 102 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RN7SKP200-201ENST00000410564 320 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 CYCSP33-201ENST00000414485 327 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RPL31P3-201ENST00000458430 332 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RNA5SP269-201ENST00000459032 137 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RNU5F-2P-201ENST00000516066 82 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 RNU6-201P-201ENST00000517100 61 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC023050.2-201ENST00000544968 387 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 MIR548AC-201ENST00000585049 88 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AL606834.3-201ENST00000602615 496 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC112191.3-201ENST00000604371 277 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC069114.2-201ENST00000604699 304 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AL109933.3-201ENST00000619095 188 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC018630.2-201ENST00000534866 2403 ntBASIC0.99□□□□□ -2.25
UPF3BQ9BZI7 AC010615.1-201ENST00000594254 1764 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 RNU6-26P-201ENST00000383985 107 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 RNU6-1176P-201ENST00000390955 107 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 RNU2-72P-201ENST00000411175 163 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 PIGPP2-201ENST00000411569 458 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 MTCO1P21-201ENST00000416634 589 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 MTND1P32-201ENST00000433043 938 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 AC010587.2-201ENST00000511727 448 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 RNA5SP330-201ENST00000517096 96 ntBASIC0.98□□□□□ -2.25
UPF3BQ9BZI7 MIR340-201ENST00000362125 95 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RNA5SP257-201ENST00000363023 116 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 SNORA63D-201ENST00000364359 132 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RNU6-1019P-201ENST00000364424 107 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RNU6-384P-201ENST00000364900 104 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 Y_RNA.458-201ENST00000384240 102 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 MIR194-1-201ENST00000384892 85 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RPL23AP32-201ENST00000395315 459 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RPS3AP36-201ENST00000398190 775 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms