Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.27-201ENST00000362540 103 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RNU6-486P-201ENST00000363116 107 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RNU6-137P-201ENST00000363680 108 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 MIR208B-201ENST00000401172 77 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 SNORA3.3-201ENST00000408712 125 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 EIF1P2-201ENST00000428233 350 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RPL27AP5-201ENST00000469428 449 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC010655.3-201ENST00000478818 450 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AP002770.2-201ENST00000543613 532 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AL390123.1-201ENST00000603216 237 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AL021879.1-201ENST00000611756 288 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 MIR7515-201ENST00000637837 67 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
TRIM55Q9BYV6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNU4-15P-201ENST00000362613 141 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNU6-525P-201ENST00000363685 104 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP42-201ENST00000364278 115 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 MIR10B-201ENST00000385011 110 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP213-201ENST00000391031 106 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNU6-159P-201ENST00000391080 106 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP201-201ENST00000410316 124 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RPS15AP7-201ENST00000439294 405 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RPS3P1-201ENST00000456781 192 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 RNU6-1198P-201ENST00000516904 67 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 AC131281.1-201ENST00000522984 164 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 AC008269.2-201ENST00000561915 1105 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 UBL5P4-201ENST00000562584 236 ntBASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM55Q9BYV6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 SNORA63.7-201ENST00000365579 123 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AP002088.1-201ENST00000382740 395 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 SNORA9-201ENST00000384215 133 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 RNU6-378P-201ENST00000384324 107 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 RNY3P4-201ENST00000384428 101 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AL139247.1-201ENST00000422768 325 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AL445305.1-201ENST00000432577 575 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AC096638.1-201ENST00000444678 216 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AC146507.2-201ENST00000460608 476 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 MRPS35P2-201ENST00000508242 191 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 MIR5695-201ENST00000579717 85 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 AC096577.2-201ENST00000611455 153 ntBASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM55Q9BYV6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 snoU2_19.1-201ENST00000362361 80 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RNU1-76P-201ENST00000362903 159 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.144-201ENST00000363521 113 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RNU6-1093P-201ENST00000391194 107 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AL035423.1-201ENST00000420331 213 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 WARS2P1-201ENST00000429678 537 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RPL21P2-201ENST00000440049 481 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC145146.1-201ENST00000496370 254 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC110794.1-201ENST00000505816 425 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC104619.4-201ENST00000510773 249 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP54-201ENST00000516951 92 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC034114.1-201ENST00000520293 285 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms