Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 USP9YP14-201ENST00000430663 563 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 MTCO3P18-201ENST00000440206 761 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 SNORD124-201ENST00000459577 104 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 MTCO3P7-201ENST00000510008 774 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 ATP5EP1-201ENST00000510257 156 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC079395.1-201ENST00000510981 262 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC090142.3-201ENST00000519012 385 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AL590705.4-201ENST00000532209 134 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.35□□□□□ -2.35
LIMD2Q9BT23 MIR4742-201ENST00000581069 85 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 FAM106DP-201ENST00000586416 501 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 MTATP6P2-201ENST00000603319 678 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 BCRP9-201ENST00000605312 388 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC024060.1-201ENST00000607052 494 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC245297.2-201ENST00000610119 565 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC131159.1-201ENST00000621854 213 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.35
LIMD2Q9BT23 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 Y_RNA.124-201ENST00000363339 93 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RNU6-534P-201ENST00000364877 106 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RNU6-224P-201ENST00000384055 107 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RNU6-190P-201ENST00000384154 102 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 MIR520E-201ENST00000384867 87 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RNU4-22P-201ENST00000411058 166 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 ELOCP17-201ENST00000414751 326 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 COX6CP10-201ENST00000416832 224 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 MTND1P18-201ENST00000448191 573 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC016925.1-201ENST00000458303 298 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RPS26P45-201ENST00000471748 340 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 MTND3P5-201ENST00000512798 333 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 Y_RNA.689-201ENST00000516589 107 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AL121579.1-201ENST00000555129 305 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 CYP3A137P-201ENST00000562436 69 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 MIR4709-201ENST00000577272 72 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 MIR3136-201ENST00000583498 78 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC136443.5-201ENST00000603741 370 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AL034555.1-201ENST00000604816 211 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC083806.3-201ENST00000614016 455 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AL158163.2-201ENST00000619110 700 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 AC018630.2-201ENST00000534866 2403 ntBASIC0.34□□□□□ -2.36
LIMD2Q9BT23 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 Y_RNA.192-201ENST00000363977 102 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 SNORA25.9-201ENST00000365087 128 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNU6-438P-201ENST00000365561 103 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNU6-769P-201ENST00000384407 104 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNU6-331P-201ENST00000384724 107 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNU6-910P-201ENST00000390844 107 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 SNORA12-201ENST00000391162 147 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 MTND3P20-201ENST00000407663 186 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC073910.1-201ENST00000445047 438 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC007395.1-201ENST00000451333 677 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 SNRPGP9-201ENST00000456025 225 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC098869.1-201ENST00000481627 292 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC021146.8-201ENST00000507455 733 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC034244.1-201ENST00000507687 207 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 FABP5P5-201ENST00000515537 406 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNA5SP384-201ENST00000516615 116 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 MIR4781-201ENST00000585250 76 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RPL17P51-201ENST00000605218 238 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC009229.3-201ENST00000608056 282 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC021506.2-201ENST00000612354 169 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 MIR6504-201ENST00000613520 61 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.33□□□□□ -2.36
LIMD2Q9BT23 AC103706.2-201ENST00000638080 240 ntBASIC0.33□□□□□ -2.36
LIMD2Q9BT23 RNA5SP361-201ENST00000362686 118 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 RNU1-93P-201ENST00000364704 169 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 RNA5SP259-201ENST00000365541 109 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 RNU6-298P-201ENST00000390888 96 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 Y_RNA.578-201ENST00000390903 88 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 RPS3AP1-201ENST00000413190 320 ntBASIC0.32□□□□□ -2.36
LIMD2Q9BT23 AL031779.1-201ENST00000415663 330 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms