Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU4-15P-201ENST00000362613 141 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 Y_RNA.38-201ENST00000362617 102 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU6-527P-201ENST00000363425 104 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNY3P3-201ENST00000363816 102 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 Y_RNA.231-201ENST00000364358 102 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU6-1141P-201ENST00000364520 107 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 Y_RNA.256-201ENST00000364594 104 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU4-66P-201ENST00000365199 138 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 Y_RNA.516-201ENST00000384541 124 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 MIR181A1-201ENST00000385026 110 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AL445646.1-201ENST00000431784 216 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RPS15AP10-201ENST00000432472 382 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 MTCO2P3-201ENST00000442543 421 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 GPM6BP3-201ENST00000442797 145 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RPS29P27-201ENST00000463711 170 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RPL21P99-201ENST00000480369 423 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC091874.1-201ENST00000511402 339 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU6-1281P-201ENST00000516223 105 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 SNORD60.2-201ENST00000516883 86 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 SNORA31.25-201ENST00000517242 134 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 RNU6-586P-201ENST00000517265 104 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC069113.1-201ENST00000517763 267 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC016957.1-201ENST00000534895 309 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC092747.3-201ENST00000603769 301 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC064836.2-201ENST00000609491 462 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 FER-210ENST00000628534 558 ntTSL 5 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 SNORA43.4-201ENST00000629559 138 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 CENPCP1-201ENST00000533085 2578 ntBASIC1.59□□□□□ -2.15
HDHD3Q9BSH5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 Y_RNA.510-201ENST00000384511 114 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MIR17-201ENST00000385012 84 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MIR561-201ENST00000385216 97 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 SNORA46.1-201ENST00000391069 153 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 EDDM3CP-201ENST00000415977 425 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 Z98742.3-201ENST00000418637 326 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 HMGN2P19-201ENST00000425149 265 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL356320.1-201ENST00000429616 163 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL133396.1-201ENST00000432048 687 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 SEPT14P3-201ENST00000439401 183 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC096638.1-201ENST00000444678 216 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL732372.2-207ENST00000445840 183 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 SEPT14P2-201ENST00000453405 183 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 RNU7-66P-201ENST00000459469 62 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 HMGN2P26-201ENST00000463169 339 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 RPS29P25-201ENST00000481709 171 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 HMGB1P35-201ENST00000503360 598 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 SEPT14P4-201ENST00000513445 186 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 Y_RNA.665-201ENST00000516177 98 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MIR514B-201ENST00000516774 80 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 FO082796.1-201ENST00000523795 183 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC118273.2-201ENST00000532092 465 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MIR1273D-201ENST00000577266 86 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC010525.2-201ENST00000590920 195 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL162413.1-201ENST00000603198 110 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL078605.1-201ENST00000603529 500 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AP001836.1-201ENST00000604675 523 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 ELOCP5-201ENST00000604924 333 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 Z82243.1-201ENST00000609432 473 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL121757.2-201ENST00000611223 313 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL161423.1-201ENST00000613700 262 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AL162373.1-201ENST00000620433 407 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MIR219B-201ENST00000637023 88 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 OR4G1P-203ENST00000641984 1631 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 AP000560.1-201ENST00000624150 1937 ntBASIC1.58□□□□□ -2.16
HDHD3Q9BSH5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 snoU2_19.1-201ENST00000362361 80 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AL445529.1-201ENST00000398713 389 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC009238.1-201ENST00000442165 424 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC009237.6-201ENST00000446969 424 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AL031274.1-201ENST00000450334 232 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC012308.1-201ENST00000451232 178 ntBASIC1.57□□□□□ -2.16
HDHD3Q9BSH5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms