Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC091435.1-201ENST00000505442 584 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 RNA5SP384-201ENST00000516615 116 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.16□□□□□ -2.38
VPS25Q9BRG1 APOOP3-201ENST00000536787 586 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
VPS25Q9BRG1 ZNF321P-202ENST00000550843 495 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 AC109446.1-201ENST00000566172 220 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS25Q9BRG1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS25Q9BRG1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS25Q9BRG1 BNIP3P19-201ENST00000605397 577 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 AC099785.1-201ENST00000605697 437 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 SNORD3E-202ENST00000627253 216 ntBASIC0.16□□□□□ -2.38
VPS25Q9BRG1 RNA5SP499-201ENST00000363982 119 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 RNU6-384P-201ENST00000364900 104 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 RNU6-505P-201ENST00000384427 107 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 RNA5SP109-201ENST00000391010 116 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 SNORA75.2-201ENST00000391138 150 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 SNORA75.3-201ENST00000391231 150 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC060773.1-201ENST00000421698 310 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC098934.3-201ENST00000430450 190 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AL163973.1-201ENST00000484753 577 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC034244.1-201ENST00000507687 207 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 MTND2P7-201ENST00000521337 640 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC090888.2-201ENST00000559765 1144 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS25Q9BRG1 DEFB131E-202ENST00000602581 683 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC012507.3-201ENST00000603556 477 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC018889.1-201ENST00000605372 397 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC116165.2-201ENST00000616705 206 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC136475.10-201ENST00000620253 385 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC100810.6-201ENST00000638068 285 ntBASIC0.15□□□□□ -2.39
VPS25Q9BRG1 AC092104.1-201ENST00000497346 1441 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 MIR412-201ENST00000362142 91 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU5A-8P-201ENST00000364102 114 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU6-877P-201ENST00000383868 107 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 SNORA80D-201ENST00000384488 135 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU6-278P-201ENST00000390945 109 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AL355796.1-201ENST00000406706 323 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 MTCO1P17-201ENST00000411522 491 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC092473.1-201ENST00000441098 221 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 MTND1P18-201ENST00000448191 573 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC233266.1-201ENST00000454518 96 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 HMGN1P12-201ENST00000499125 195 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU6-1098P-201ENST00000516772 96 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU6-677P-201ENST00000516914 101 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 CYP3A137P-201ENST00000562436 69 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 MIR3146-201ENST00000580367 79 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC092106.3-201ENST00000611308 722 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC242852.1-201ENST00000612151 96 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 AC244015.1-201ENST00000622301 99 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 SCARNA4-202ENST00000625402 129 ntBASIC0.14□□□□□ -2.39
VPS25Q9BRG1 RNU6-534P-201ENST00000364877 106 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 RPL21P1-201ENST00000399532 476 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 TIMM9P2-201ENST00000419324 266 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 Z82205.1-201ENST00000428456 297 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AL606517.2-201ENST00000442855 241 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 MTCYBP1-201ENST00000454315 1119 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 RNU7-14P-201ENST00000459331 62 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 RNU7-21P-201ENST00000459430 62 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AC010587.2-201ENST00000511727 448 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 MTND3P5-201ENST00000512798 333 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 Y_RNA.689-201ENST00000516589 107 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 MIR3912-201ENST00000577566 105 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 MIR4714-201ENST00000580728 77 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AL138955.1-201ENST00000622881 1040 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 AL603839.4-201ENST00000624658 1005 ntBASIC0.13□□□□□ -2.39
VPS25Q9BRG1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
VPS25Q9BRG1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.12□□□□□ -2.39
VPS25Q9BRG1 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
VPS25Q9BRG1 RNU6-190P-201ENST00000384154 102 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 SNORD41-201ENST00000386967 70 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 MIR764-201ENST00000390811 85 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 MTCO1P21-201ENST00000416634 589 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 VPS26BP1-201ENST00000417155 755 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms