Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 PDCD5P2-201ENST00000507570 312 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 RNU5F-2P-201ENST00000516066 82 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.687-201ENST00000516558 91 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AC087894.1-201ENST00000538359 518 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 MTND3P13-201ENST00000574391 343 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AC174048.1-201ENST00000603389 144 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AL138889.2-201ENST00000603883 242 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AL022154.1-201ENST00000604698 785 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.355-201ENST00000365462 98 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.508-201ENST00000384502 114 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AL356776.1-201ENST00000406574 447 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 ELOCP17-201ENST00000414751 326 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 ELOCP9-201ENST00000418624 239 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 USP9YP21-201ENST00000420603 432 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 MTCO3P29-201ENST00000432119 779 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 SNRPEP8-201ENST00000442866 260 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 ATP5J2P3-201ENST00000451550 258 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 RPS26P45-201ENST00000471748 340 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC119751.4-201ENST00000507498 357 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC113347.3-201ENST00000509113 148 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 SNORA43.2-201ENST00000516652 128 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AC008751.2-201ENST00000597885 980 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
LYSMD1Q96S90 MIR3976-201ENST00000606807 139 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 AL512506.1-201ENST00000613918 449 ntBASIC0.54□□□□□ -2.32
LYSMD1Q96S90 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.311-201ENST00000365068 96 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 RN7SKP266-201ENST00000410232 287 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 MTCO3P41-201ENST00000414801 328 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AC069257.2-201ENST00000441819 155 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 ART2BP-201ENST00000453501 499 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 snoU13.18-201ENST00000459483 104 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.53□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.689-201ENST00000516589 107 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.53□□□□□ -2.32
LYSMD1Q96S90 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AL451064.1-201ENST00000607718 471 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 AL138955.1-201ENST00000622881 1040 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 FRG1KP-201ENST00000623592 341 ntBASIC0.53□□□□□ -2.32
LYSMD1Q96S90 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 RNU6-862P-201ENST00000362804 105 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 Y_RNA.269-201ENST00000364685 89 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 RNA5SP259-201ENST00000365541 109 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC114482.1-201ENST00000418010 247 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 ARL5AP1-201ENST00000418991 388 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 GTF2IP13-201ENST00000438487 386 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC112206.3-201ENST00000514578 389 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC090142.3-201ENST00000519012 385 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 BNIP3P6-201ENST00000549284 499 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 SNORA59B-202ENST00000578183 701 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 VN1R82P-201ENST00000601481 356 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 DEFB131E-202ENST00000602581 683 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC018889.1-201ENST00000605372 397 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AL512427.1-201ENST00000618593 349 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 AC068880.4-201ENST00000623082 495 ntBASIC0.52□□□□□ -2.33
LYSMD1Q96S90 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.52□□□□□ -2.33
LYSMD1Q96S90 RNY3P13-201ENST00000365542 102 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 RNU6-438P-201ENST00000365561 103 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 RNU6-946P-201ENST00000383878 107 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 COX6CP10-201ENST00000416832 224 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 MTND4P20-201ENST00000424125 869 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 USP9YP11-201ENST00000427537 717 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC021146.8-201ENST00000507455 733 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC074344.1-201ENST00000512823 224 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 RNU6-165P-201ENST00000517170 99 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 LRRC6P1-201ENST00000532188 885 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 BNIP3P26-201ENST00000600827 554 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC105129.3-201ENST00000605455 485 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AC091948.2-201ENST00000636510 279 ntBASIC0.51□□□□□ -2.33
LYSMD1Q96S90 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
LYSMD1Q96S90 AL159152.1-201ENST00000635019 2587 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU6-1235P-201ENST00000384559 107 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms