Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RPS29P13-201ENST00000402041 169 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 AC002075.2-201ENST00000425207 252 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 TOMM20P4-201ENST00000427861 435 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 NDUFB1P1-201ENST00000435191 180 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 RPS29P12-201ENST00000460178 152 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 RN7SKP57-201ENST00000517248 293 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 AC004024.1-201ENST00000549244 247 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.88□□□□□ -1.95
ZNF48Q96MX3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF48Q96MX3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RNU6-227P-201ENST00000362865 103 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 SNORD17-201ENST00000390930 237 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 SNORA40C-201ENST00000391285 128 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RNA5SP120-201ENST00000410900 112 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC005300.1-201ENST00000428401 373 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC005326.1-201ENST00000429197 123 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 CYCSP32-201ENST00000440548 321 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RPS29P31-201ENST00000446147 164 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC115115.1-201ENST00000449927 248 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AL138752.1-201ENST00000452964 351 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 U8.22-201ENST00000459141 133 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RNU7-87P-201ENST00000459343 62 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AL160314.1-201ENST00000490836 438 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RAC1P5-201ENST00000512182 576 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 MIR2355-201ENST00000517199 87 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC022868.1-201ENST00000517767 391 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 RPL23AP78-201ENST00000599928 470 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AL645944.1-201ENST00000603857 493 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 MIR7851-201ENST00000610611 160 ntBASIC2.87□□□□□ -1.95
ZNF48Q96MX3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF48Q96MX3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 MFSD8-233ENST00000641482 4860 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RNU6-198P-201ENST00000384258 104 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AL079342.1-201ENST00000401460 267 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 MIR1298-201ENST00000408783 112 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 Z92545.1-201ENST00000411782 234 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RPL23AP82-202ENST00000427528 469 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AL512844.2-201ENST00000433990 593 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RPL23AP58-201ENST00000440453 469 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RNU2-27P-201ENST00000516185 142 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 SNORA31.19-201ENST00000517079 126 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC010186.2-204ENST00000537668 439 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 MIR4738-201ENST00000579134 87 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC005000.2-201ENST00000605468 310 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC127459.3-201ENST00000624328 466 ntBASIC2.86□□□□□ -1.95
ZNF48Q96MX3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF48Q96MX3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF48Q96MX3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ZNF48Q96MX3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF48Q96MX3 RNA5SP42-201ENST00000364278 115 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 RNU6-336P-201ENST00000364891 107 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 RNU6-662P-201ENST00000384253 104 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 MIR34A-201ENST00000385130 110 ntBASIC2.85□□□□□ -1.95
ZNF48Q96MX3 U3.39-201ENST00000408569 239 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms