Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RPS3AP17-201ENST00000472594 777 ntBASIC-0.23□□□□□ -2.45
SPG11Q96JI7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
SPG11Q96JI7 AP001328.1-201ENST00000528550 176 ntBASIC-0.23□□□□□ -2.45
SPG11Q96JI7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPG11Q96JI7 AC138749.5-201ENST00000611461 208 ntBASIC-0.23□□□□□ -2.45
SPG11Q96JI7 CASC19-280ENST00000642102 1351 ntBASIC-0.23□□□□□ -2.45
SPG11Q96JI7 MIR18A-201ENST00000362310 71 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC007435.1-201ENST00000421086 415 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL590383.1-201ENST00000428602 75 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 CECR9-201ENST00000453421 199 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC079598.5-201ENST00000547460 117 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC124947.2-202ENST00000552735 133 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC005951.2-201ENST00000576282 495 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 MIR3136-201ENST00000583498 78 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 MIR8076-201ENST00000611401 83 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RNU5E-1-201ENST00000362477 120 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 TAF9BP2-201ENST00000400856 499 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RPS29P15-201ENST00000458329 171 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC114811.1-201ENST00000507207 168 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC010460.2-201ENST00000509054 677 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 MTND1P22-201ENST00000510572 951 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL590229.1-201ENST00000603497 542 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL161729.4-201ENST00000604650 476 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 AL360219.1-201ENST00000610230 366 ntBASIC-0.24□□□□□ -2.45
SPG11Q96JI7 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNU6-862P-201ENST00000362804 105 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNU1-39P-201ENST00000383897 165 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNA5SP109-201ENST00000391010 116 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 MTCO2P34-201ENST00000421994 607 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AL353777.1-201ENST00000425552 326 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNU7-159P-201ENST00000459284 62 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC104136.1-201ENST00000512969 394 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RN7SKP12-201ENST00000516275 143 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AL353765.1-201ENST00000605514 183 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC010615.1-201ENST00000594254 1764 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNA5SP259-201ENST00000365541 109 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RN7SKP266-201ENST00000410232 287 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 SEPT7P5-201ENST00000434048 306 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RPL23AP50-201ENST00000434149 455 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 BRK1P2-201ENST00000442875 223 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 RNU6-667P-201ENST00000517186 102 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 SNORA25.18-201ENST00000607153 114 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 MIR6738-201ENST00000619620 64 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC084824.4-201ENST00000620106 731 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC090772.4-201ENST00000623599 362 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 AC079416.3-201ENST00000624479 549 ntBASIC-0.25□□□□□ -2.45
SPG11Q96JI7 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPG11Q96JI7 SNORD14C-201ENST00000365382 88 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU6-741P-201ENST00000383889 107 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 MIR888-201ENST00000401186 77 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU6-735P-201ENST00000410612 107 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC022861.1-201ENST00000522981 663 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 POLR2KP1-201ENST00000553226 168 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AL132657.2-201ENST00000564417 358 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AL357312.1-201ENST00000603879 298 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC009032.1-201ENST00000617574 431 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC018926.3-201ENST00000618841 406 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 MIR8063-201ENST00000621930 81 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 SNORD3E-202ENST00000627253 216 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU6-944P-201ENST00000364023 107 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU6-925P-201ENST00000384629 104 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 MIR548B-201ENST00000385247 97 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AL603865.2-201ENST00000401679 213 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC093422.3-201ENST00000428506 305 ntBASIC-0.26□□□□□ -2.45
SPG11Q96JI7 AC243964.1-201ENST00000441814 261 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms