Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VMP1Q96GC9 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.03□□□□□ -2.08
VMP1Q96GC9 OOSP1P1-201ENST00000423265 274 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AL133396.1-201ENST00000432048 687 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.03□□□□□ -2.08
VMP1Q96GC9 AC016632.1-201ENST00000503994 196 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.03□□□□□ -2.08
VMP1Q96GC9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AC087441.2-201ENST00000529141 262 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 HIF1AP1-201ENST00000553642 175 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 AC009314.1-201ENST00000603871 304 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 RNU6-85P-201ENST00000605989 107 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.03□□□□□ -2.08
VMP1Q96GC9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.03□□□□□ -2.08
VMP1Q96GC9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 MTCYBP8-201ENST00000422855 651 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.02□□□□□ -2.09
VMP1Q96GC9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.02□□□□□ -2.09
VMP1Q96GC9 RPL23AP95-201ENST00000426806 265 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 FTH1P25-201ENST00000447665 469 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 RNU6-956P-201ENST00000458868 103 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 RPL9P6-201ENST00000492764 598 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 AC026407.1-201ENST00000518369 204 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.02□□□□□ -2.09
VMP1Q96GC9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
VMP1Q96GC9 OSBPL9P5-201ENST00000542581 171 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 MTND3P12-201ENST00000559068 328 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 MIR3169-201ENST00000578032 83 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 Z99497.2-201ENST00000603634 310 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VMP1Q96GC9 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
VMP1Q96GC9 SNORD114-6-201ENST00000364393 72 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 RNU6-996P-201ENST00000365438 107 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 SNORD116-8-201ENST00000384365 95 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 CETN4P-201ENST00000432407 469 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 AC027575.1-201ENST00000481064 460 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 RNVU1-2-201ENST00000516326 135 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 MIR4298-201ENST00000584380 73 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 DUXAP9-208ENST00000622815 614 ntBASIC2.01□□□□□ -2.09
VMP1Q96GC9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VMP1Q96GC9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VMP1Q96GC9 LINC02555-201ENST00000563933 1951 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 U3.9-201ENST00000363823 204 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 SNORA26.3-201ENST00000391119 136 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 VN1R36P-201ENST00000414936 291 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC123900.1-201ENST00000420390 96 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC073464.1-201ENST00000429823 534 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
VMP1Q96GC9 HSPE1P21-201ENST00000438283 308 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2□□□□□ -2.09
VMP1Q96GC9 RNU6-567P-201ENST00000516746 107 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 MTND4P7-201ENST00000523876 130 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 CBX3P4-201ENST00000538909 354 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2□□□□□ -2.09
VMP1Q96GC9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2□□□□□ -2.09
VMP1Q96GC9 AC004223.2-201ENST00000590309 544 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC078795.3-201ENST00000602913 472 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC073648.5-201ENST00000603502 305 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC012507.3-201ENST00000603556 477 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC010900.2-201ENST00000604508 210 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AP001836.1-201ENST00000604675 523 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 AC087241.4-201ENST00000612441 480 ntBASIC2□□□□□ -2.09
VMP1Q96GC9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
VMP1Q96GC9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VMP1Q96GC9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
VMP1Q96GC9 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 RNU6-438P-201ENST00000365561 103 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 Y_RNA.504-201ENST00000384481 104 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 RNU6-1106P-201ENST00000390845 107 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 RNA5SP201-201ENST00000410316 124 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.99□□□□□ -2.09
VMP1Q96GC9 MTCO3P41-201ENST00000414801 328 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 VN1R108P-201ENST00000431580 830 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 MTND1P26-201ENST00000440488 538 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AC098826.2-201ENST00000452011 651 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.99□□□□□ -2.09
VMP1Q96GC9 RNU1-131P-201ENST00000458943 161 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 RNU7-180P-201ENST00000459240 63 ntBASIC1.99□□□□□ -2.09
VMP1Q96GC9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms