Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP000654.2-201ENST00000605633 586 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AC122133.1-201ENST00000613964 233 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AP001506.1-201ENST00000615444 211 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MIR340-201ENST00000362125 95 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-37P-201ENST00000362692 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU4-21P-201ENST00000362802 126 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-11P-201ENST00000364234 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1141P-201ENST00000364520 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1303P-201ENST00000364841 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-25P-201ENST00000383873 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-338P-201ENST00000383888 105 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1-201ENST00000383898 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-48P-201ENST00000384161 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-36P-201ENST00000384172 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-4P-201ENST00000384205 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-5P-201ENST00000384238 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-3P-201ENST00000384314 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-16P-201ENST00000384385 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-15P-201ENST00000384534 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-2-201ENST00000384627 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-29P-201ENST00000384637 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-9-201ENST00000384776 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-33P-201ENST00000384793 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RPS29P13-201ENST00000402041 169 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MTCYBP2-201ENST00000407745 171 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-195P-201ENST00000411352 109 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 AL590556.1-201ENST00000423231 483 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 AL022238.1-201ENST00000442557 355 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MTND1P18-201ENST00000448191 573 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU1-131P-201ENST00000458943 161 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RN7SKP210-201ENST00000459176 261 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MTND3P5-201ENST00000512798 333 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-377P-201ENST00000515965 102 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-759P-201ENST00000516740 103 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 AC109479.2-201ENST00000517842 174 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MTCO3P23-201ENST00000561363 289 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 MIR3136-201ENST00000583498 78 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 RNU6-6P-201ENST00000606623 107 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 U6.114-201ENST00000636407 96 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
ECHDC3Q96DC8 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1287P-201ENST00000362914 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-23P-201ENST00000363283 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 U3.4-201ENST00000363352 213 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 SNORD32A-201ENST00000364805 84 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-336P-201ENST00000364891 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-43P-201ENST00000384302 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-692P-201ENST00000384496 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-297P-201ENST00000384636 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1060P-201ENST00000384664 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 SNORA12-201ENST00000391162 147 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL357134.1-201ENST00000445848 426 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 HMGN2P18-201ENST00000450680 270 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL033528.1-201ENST00000453780 140 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU7-182P-201ENST00000459009 62 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 Y_RNA.638-201ENST00000459374 113 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 SNORD42A-201ENST00000459584 64 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC010409.1-201ENST00000487382 476 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC145146.1-201ENST00000496370 254 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1178P-201ENST00000516674 107 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 MTND1P24-201ENST00000552175 861 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 BNIP3P10-201ENST00000605360 577 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC123912.5-201ENST00000605470 343 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC008250.2-201ENST00000615261 205 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AL590240.4-201ENST00000616908 390 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 AC008993.2-201ENST00000631744 806 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 SNORD98-201ENST00000636377 67 ntBASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ECHDC3Q96DC8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 LINC02555-201ENST00000563933 1951 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 MIR1-2-201ENST00000384961 85 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 SNORA26.3-201ENST00000391119 136 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 RNA5SP201-201ENST00000410316 124 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 RNU6-248P-201ENST00000410720 107 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 RNU4-46P-201ENST00000410818 138 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 RNU6-293P-201ENST00000411259 106 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms