Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNA5SP384-201ENST00000516615 116 ntBASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 RNU6-264P-201ENST00000517134 104 ntBASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 AL356055.1-201ENST00000602528 446 ntBASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM43Q96BQ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 SNORD114-19-201ENST00000363072 75 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 U8.2-201ENST00000363156 134 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 SNORA3.2-201ENST00000408221 125 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AL031659.1-201ENST00000447075 539 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AP002770.2-201ENST00000543613 532 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 HMGB1P24-202ENST00000615653 685 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM43Q96BQ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 RNU6-1040P-201ENST00000383974 107 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 RNU6-784P-201ENST00000384330 106 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 SNORA41-201ENST00000384675 132 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 MIR1302-11-201ENST00000408051 138 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 MIR1302-9-201ENST00000408365 138 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 MIR1302-10-201ENST00000408734 138 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC009963.1-201ENST00000417265 157 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC007375.1-201ENST00000554513 578 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 MIR1302-2-201ENST00000607096 138 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
TRIM43Q96BQ3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TRIM43Q96BQ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM43Q96BQ3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 ZNF299P-201ENST00000406845 1804 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU6-212P-201ENST00000362642 104 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 SNORD32A-201ENST00000364805 84 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU6-142P-201ENST00000384019 107 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC011816.1-201ENST00000441346 546 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 MIR2053-201ENST00000459295 91 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RPL36AP48-201ENST00000485521 314 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RPL22P13-201ENST00000493291 347 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU6-1153P-201ENST00000516760 105 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 CBX3P8-201ENST00000532412 525 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AL080274.1-201ENST00000605565 220 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC009318.2-201ENST00000610917 651 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AL109809.4-201ENST00000603520 2185 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
TRIM43Q96BQ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 ZNF658B-202ENST00000615961 3375 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 MIR369-201ENST00000362155 70 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 SNORD50.1-201ENST00000362987 71 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RNU2-23P-201ENST00000410545 195 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RNU6-55P-201ENST00000411092 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 1122.1 ms