Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RNA5SP293-201ENST00000410527 113 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 RNU2-25P-201ENST00000411041 191 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 Z96811.1-201ENST00000445880 108 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 RPL7P42-201ENST00000481005 679 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AC023141.11-201ENST00000508864 202 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 MIR5701-3-201ENST00000578890 82 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 MIR5004-201ENST00000579078 107 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 MIR5701-1-201ENST00000585138 82 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AC100812.1-201ENST00000607622 580 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 MIR5701-2-201ENST00000615634 82 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AC090971.5-201ENST00000621102 293 ntBASIC4.09□□□□□ -1.75
ZNF428Q96B54 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ZNF428Q96B54 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF428Q96B54 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ZNF428Q96B54 AC080128.1-201ENST00000474389 1917 ntBASIC4.09□□□□□ -1.76
ZNF428Q96B54 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
ZNF428Q96B54 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
ZNF428Q96B54 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ZNF428Q96B54 RNY1P16-201ENST00000363063 111 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 SNORD56.3-201ENST00000363507 71 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 Y_RNA.216-201ENST00000364205 93 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF428Q96B54 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF428Q96B54 SNORA29-201ENST00000384183 140 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 AC007098.1-201ENST00000420122 367 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF428Q96B54 snoU13.30-201ENST00000458951 104 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 Y_RNA.639-201ENST00000458981 102 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 RNU6-470P-201ENST00000515954 104 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 RNA5SP54-201ENST00000516951 92 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 RNU7-4P-201ENST00000516961 62 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF428Q96B54 AP003072.1-201ENST00000531740 145 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.08□□□□□ -1.76
ZNF428Q96B54 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.08□□□□□ -1.76
ZNF428Q96B54 AL356280.1-201ENST00000603614 379 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 HMGB1P24-202ENST00000615653 685 ntBASIC4.08□□□□□ -1.76
ZNF428Q96B54 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZNF428Q96B54 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF428Q96B54 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.07□□□□□ -1.76
ZNF428Q96B54 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF428Q96B54 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF428Q96B54 MIR422A-201ENST00000362286 90 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 RNU6-461P-201ENST00000364195 107 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 Y_RNA.395-201ENST00000383945 109 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 MIR153-2-201ENST00000385225 87 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 MIR320B2-201ENST00000408479 138 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 RNA5SP494-201ENST00000410653 129 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AL358453.1-201ENST00000422522 250 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 RPL30P4-201ENST00000429309 333 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 MTCYBP6-201ENST00000441810 138 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC090525.1-201ENST00000479116 478 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.07□□□□□ -1.76
ZNF428Q96B54 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.07□□□□□ -1.76
ZNF428Q96B54 RPL30P11-203ENST00000598995 310 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AL138825.1-201ENST00000618587 192 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC018692.3-201ENST00000623929 123 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC243829.7-201ENST00000633081 225 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AL137790.1-201ENST00000634283 177 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 AC069528.2-201ENST00000624849 1991 ntBASIC4.07□□□□□ -1.76
ZNF428Q96B54 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF428Q96B54 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF428Q96B54 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF428Q96B54 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF428Q96B54 RNU6-1059P-201ENST00000363752 98 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 SNORD115-8-201ENST00000363856 82 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 Y_RNA.197-201ENST00000364004 102 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 SNORD115-38-201ENST00000365037 82 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 RNU2-63P-201ENST00000410792 194 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 RPL32P35-201ENST00000415214 394 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC008267.5-201ENST00000424928 265 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF428Q96B54 OR2AQ1P-201ENST00000451972 200 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC132942.1-201ENST00000486753 483 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 RPL23AP75-201ENST00000491601 451 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC008885.1-201ENST00000514930 301 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 MIR2355-201ENST00000517199 87 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC022080.3-201ENST00000544433 482 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 MIR3199-1-201ENST00000582434 88 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 MIR4325-201ENST00000583049 90 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 Z98751.3-201ENST00000604447 521 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AC099778.2-201ENST00000610904 211 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 AL450472.1-202ENST00000637286 180 ntBASIC4.06□□□□□ -1.76
ZNF428Q96B54 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ZNF428Q96B54 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF428Q96B54 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms