Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC123767.1-202ENST00000620407 817 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TTC28Q96AY4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RNU6-898P-201ENST00000365627 104 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 MIR587-201ENST00000384845 96 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TTC28Q96AY4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 ZFAND6P1-201ENST00000434138 605 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 UBE2V1P8-201ENST00000437166 265 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 PTGES3P1-201ENST00000439531 483 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC027119.1-201ENST00000440877 241 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 PRPS1P1-201ENST00000445305 876 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC023194.1-201ENST00000493084 308 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC091959.1-201ENST00000495857 238 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC009646.1-201ENST00000510455 318 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RNA5SP404-201ENST00000517118 132 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 MIR3115-201ENST00000577915 68 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AL353997.4-201ENST00000586196 166 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNU6-932P-201ENST00000391108 106 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AL590084.2-201ENST00000401481 382 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 COX7BP2-201ENST00000437976 242 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 snoU13.8-201ENST00000458890 104 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 HMGN1P13-201ENST00000505795 138 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 MTCYBP43-201ENST00000513621 740 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNVU1-2-201ENST00000516326 135 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AP003034.1-201ENST00000534621 422 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC018630.3-201ENST00000542637 96 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 VN1R83P-201ENST00000595685 445 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TTC28Q96AY4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNU6-10P-201ENST00000384036 107 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNU6-15P-201ENST00000384534 107 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AL603865.2-201ENST00000401679 213 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 MTND1P28-201ENST00000435623 950 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AL353813.1-201ENST00000440700 253 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNU6-333P-201ENST00000459117 107 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 MTND5P13-201ENST00000513046 1079 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 SNORA31.17-201ENST00000516953 127 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 AL158211.1-201ENST00000566763 763 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
TTC28Q96AY4 MIR5692A1-201ENST00000580523 69 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 NIFKP6-201ENST00000598115 845 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 ZNF92P2-201ENST00000600543 1059 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AP002906.1-201ENST00000603405 233 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 AC103705.1-201ENST00000619013 241 ntBASIC0.31□□□□□ -2.36
TTC28Q96AY4 RNU6-1010P-201ENST00000362757 107 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 SNORD49B-201ENST00000365172 72 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RNU6-360P-201ENST00000390944 104 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL359634.1-202ENST00000404721 284 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 NCOR1P3-201ENST00000420479 303 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC069257.2-201ENST00000441819 155 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL096829.2-201ENST00000446582 742 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC011005.2-201ENST00000487324 359 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RPL23AP54-201ENST00000495129 419 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RNU6-803P-201ENST00000516034 102 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RNU6-390P-201ENST00000516259 103 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RNU6-980P-201ENST00000516925 103 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RN7SKP256-201ENST00000517201 314 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL365434.2-201ENST00000607979 234 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC092447.10-201ENST00000620607 1652 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 OR5T3-201ENST00000303059 1023 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 Y_RNA.234-201ENST00000364409 97 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RNU6-968P-201ENST00000384076 107 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 Y_RNA.437-201ENST00000384113 113 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 MIR186-201ENST00000384988 86 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC069282.1-201ENST00000411911 526 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 RPS3AP37-201ENST00000419176 745 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RAC1P6-201ENST00000423911 575 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 MTND4LP7-201ENST00000431728 294 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 EEF1E1P1-201ENST00000446998 430 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 RPL30P7-201ENST00000479312 323 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms