Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 Z75746.1-201ENST00000440243 2080 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AP000560.1-201ENST00000624150 1937 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 AC233981.2-201ENST00000611524 1614 ntBASIC3.22□□□□□ -1.89
HPS3Q969F9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HPS3Q969F9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS3Q969F9 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 SNORD50.1-201ENST00000362987 71 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 RNU6-486P-201ENST00000363116 107 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 U3.13-201ENST00000364804 214 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 RNU6-968P-201ENST00000384076 107 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 RNU1-57P-201ENST00000384491 166 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS3Q969F9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS3Q969F9 GPM6BP3-201ENST00000442797 145 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS3Q969F9 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS3Q969F9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS3Q969F9 AP002404.1-201ENST00000532005 451 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.21□□□□□ -1.9
HPS3Q969F9 AC093249.1-201ENST00000567049 203 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 MIR5696-201ENST00000578474 85 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AC044792.1-201ENST00000593294 196 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AC006386.2-201ENST00000624491 75 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 AC012005.1-201ENST00000624575 75 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS3Q969F9 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
HPS3Q969F9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HPS3Q969F9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.2□□□□□ -1.9
HPS3Q969F9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 RNU6-1040P-201ENST00000383974 107 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 Y_RNA.533-201ENST00000384596 114 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 RNA5SP492-201ENST00000411330 114 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 MTCO2P12-201ENST00000427426 682 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 RPL23AP94-201ENST00000512518 302 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 Y_RNA.701-201ENST00000516812 110 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 CBX3P8-201ENST00000532412 525 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AC007536.1-201ENST00000533382 349 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AC021231.3-201ENST00000558497 370 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AL359198.2-201ENST00000611836 194 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 AL159153.1-201ENST00000619688 317 ntBASIC3.2□□□□□ -1.9
HPS3Q969F9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HPS3Q969F9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
HPS3Q969F9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS3Q969F9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS3Q969F9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS3Q969F9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPS3Q969F9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS3Q969F9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPS3Q969F9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPS3Q969F9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 SNORA68.1-201ENST00000364537 132 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 RNU4-56P-201ENST00000364700 142 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 RNU6-1011P-201ENST00000384668 107 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS3Q969F9 NUP35P1-201ENST00000422734 947 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS3Q969F9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS3Q969F9 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC079354.2-201ENST00000453523 154 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS3Q969F9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS3Q969F9 snoU13.14-201ENST00000459372 104 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS3Q969F9 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC022447.4-201ENST00000504053 364 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC091874.1-201ENST00000511402 339 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 SNORA25.11-201ENST00000515935 105 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 RNU6-470P-201ENST00000515954 104 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.19□□□□□ -1.9
HPS3Q969F9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS3Q969F9 MIR3136-201ENST00000583498 78 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HPS3Q969F9 AC138915.1-201ENST00000565427 1685 ntBASIC3.19□□□□□ -1.9
HPS3Q969F9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HPS3Q969F9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HPS3Q969F9 RNU6-655P-201ENST00000362858 107 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 RNU6-490P-201ENST00000362985 107 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 RNU6-529P-201ENST00000363383 104 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 MIR186-201ENST00000384988 86 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AL451074.5-201ENST00000415894 435 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.18□□□□□ -1.9
HPS3Q969F9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS3Q969F9 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AL353705.4-201ENST00000449661 238 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 RPL17P19-201ENST00000489069 552 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AC022493.2-201ENST00000506122 481 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS3Q969F9 RNU6-567P-201ENST00000516746 107 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms