Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC079354.2-201ENST00000453523 154 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 SNRPGP7-201ENST00000469016 106 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 RNU6-1213P-201ENST00000517075 94 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.718-201ENST00000517110 102 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 RNA5SP380-201ENST00000517190 98 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC115990.1-201ENST00000526957 301 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 HSPE1P4-201ENST00000550617 308 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 MIR3945-201ENST00000581853 98 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 PISRT1.1-201ENST00000616930 107 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AP000560.1-201ENST00000624150 1937 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC080128.1-201ENST00000474389 1917 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 OR56A5-201ENST00000340110 738 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 RNU6-212P-201ENST00000362642 104 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 RNY4P36-201ENST00000391116 96 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AL078595.1-201ENST00000404458 226 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AIMP1P2-201ENST00000425294 312 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC236972.2-201ENST00000434979 310 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 FO393415.2-201ENST00000480085 343 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 RN7SKP282-201ENST00000516824 299 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AL627309.6-201ENST00000606857 840 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 AC009318.2-201ENST00000610917 651 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 MIR7157-201ENST00000635801 60 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HMGB4Q8WW32 MTND4P29-201ENST00000503122 1372 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 MTND5P19-201ENST00000424872 1794 ntBASIC2.82□□□□□ -1.96
HMGB4Q8WW32 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.2-201ENST00000362330 96 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.259-201ENST00000364619 101 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 U3.13-201ENST00000364804 214 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.535-201ENST00000384612 99 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 RNU6-310P-201ENST00000384655 107 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 SNORA26.3-201ENST00000391119 136 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.646-201ENST00000410980 101 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 EIF1AXP1-201ENST00000419267 435 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MTCO2P27-201ENST00000420740 428 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AF228730.4-201ENST00000421457 183 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC008267.5-201ENST00000424928 265 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 USMG5P1-201ENST00000425964 177 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 RPL30P4-201ENST00000429309 333 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.653-201ENST00000459091 95 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AL121594.1-201ENST00000475906 575 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 RPL30P1-201ENST00000488676 339 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC104564.1-201ENST00000493028 407 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC016632.1-201ENST00000503994 196 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC005741.1-201ENST00000511094 432 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 RNA5SP384-201ENST00000516615 116 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 SCARNA3-201ENST00000517097 143 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MIR5696-201ENST00000578474 85 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MIR3199-1-201ENST00000582434 88 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 MIR4273-201ENST00000582824 84 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 AL450472.1-202ENST00000637286 180 ntBASIC2.81□□□□□ -1.96
HMGB4Q8WW32 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGB4Q8WW32 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGB4Q8WW32 MTND5P9-201ENST00000503854 1755 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AC092268.1-201ENST00000342691 405 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU6-655P-201ENST00000362858 107 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU6-461P-201ENST00000364195 107 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.504-201ENST00000384481 104 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGB4Q8WW32 MTCO3P10-201ENST00000455912 772 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 ELOCP24-201ENST00000456370 334 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU7-152P-201ENST00000458982 64 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AC097473.1-201ENST00000508142 408 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU5F-2P-201ENST00000516066 82 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU2-53P-201ENST00000516257 147 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms