Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.53□□□□□ -2.32
RTL9Q8NET4 AL132657.2-201ENST00000564417 358 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 MTCO2P2-201ENST00000591258 225 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.53□□□□□ -2.32
RTL9Q8NET4 AC069114.2-201ENST00000604699 304 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 AL365204.3-201ENST00000612448 685 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.53□□□□□ -2.32
RTL9Q8NET4 AC068647.2-201ENST00000637380 353 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 AC099654.8-201ENST00000637757 681 ntBASIC0.53□□□□□ -2.32
RTL9Q8NET4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 RNU6-395P-201ENST00000365662 106 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 RNU6-72P-201ENST00000384285 79 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 RNU6-331P-201ENST00000384724 107 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC123900.1-201ENST00000420390 96 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 MTCYBP5-201ENST00000423752 1135 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC010099.3-201ENST00000423896 409 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 LARP1BP3-201ENST00000437229 869 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL139824.2-201ENST00000458731 1095 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 snoU13.30-201ENST00000458951 104 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC005741.1-201ENST00000511094 432 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL136520.1-202ENST00000555494 763 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC022893.3-201ENST00000607665 437 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AL159153.1-201ENST00000619688 317 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC104985.3-201ENST00000623479 597 ntBASIC0.52□□□□□ -2.33
RTL9Q8NET4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.52□□□□□ -2.33
RTL9Q8NET4 RNU6-777P-201ENST00000364265 104 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 MIR194-1-201ENST00000384892 85 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 AL603865.2-201ENST00000401679 213 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 RAP1BP3-201ENST00000407180 549 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 Y_RNA.623-201ENST00000411128 95 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 AP000542.1-201ENST00000448473 371 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
RTL9Q8NET4 AC093899.1-201ENST00000457984 376 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 SNORD60.2-201ENST00000516883 86 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.51□□□□□ -2.33
RTL9Q8NET4 DEFB130C-202ENST00000530001 230 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.51□□□□□ -2.33
RTL9Q8NET4 AL355816.2-201ENST00000610049 647 ntBASIC0.51□□□□□ -2.33
RTL9Q8NET4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.51□□□□□ -2.33
RTL9Q8NET4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
RTL9Q8NET4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.5□□□□□ -2.33
RTL9Q8NET4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 snoZ40.1-201ENST00000364540 72 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.5□□□□□ -2.33
RTL9Q8NET4 MIR320C1-201ENST00000408566 88 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 RNA5SP127-201ENST00000411051 133 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.5□□□□□ -2.33
RTL9Q8NET4 MTCO2P25-201ENST00000447065 681 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 RPS26P45-201ENST00000471748 340 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 RNU6-197P-201ENST00000516680 100 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.5□□□□□ -2.33
RTL9Q8NET4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 AC130324.3-201ENST00000614165 542 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.5□□□□□ -2.33
RTL9Q8NET4 RNU6-1019P-201ENST00000364424 107 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 SNORD114-24-201ENST00000365029 72 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 RNU6-609P-201ENST00000365459 107 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 MIR19B1-201ENST00000384829 87 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 AL627311.1-201ENST00000431514 115 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC099677.2-201ENST00000436385 175 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 RNU4-57P-201ENST00000515980 135 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 RNU5F-2P-201ENST00000516066 82 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 RNU6-677P-201ENST00000516914 101 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC091163.3-201ENST00000518269 1144 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 MIR4514-201ENST00000581410 57 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 HMGN1P30-201ENST00000589286 268 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC099785.1-201ENST00000605697 437 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AL451064.1-201ENST00000607718 471 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AC040896.1-201ENST00000613819 479 ntBASIC0.49□□□□□ -2.33
RTL9Q8NET4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.49□□□□□ -2.33
RTL9Q8NET4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RTL9Q8NET4 SNORD56.1-201ENST00000362913 68 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 SNORA75B-201ENST00000384053 137 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 RNU6-1176P-201ENST00000390955 107 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 BTF3L4P1-201ENST00000413813 468 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.48□□□□□ -2.33
RTL9Q8NET4 AC114482.1-201ENST00000418010 247 ntBASIC0.48□□□□□ -2.33
RTL9Q8NET4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.48□□□□□ -2.33
RTL9Q8NET4 SNRPEP8-201ENST00000442866 260 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms