Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 MIR30E-201ENST00000362104 92 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 SNORD35B-201ENST00000363660 87 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 Y_RNA.214-201ENST00000364201 112 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 SNORA18.2-201ENST00000383865 132 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNU6-926P-201ENST00000384075 107 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 MIR549A-201ENST00000385268 96 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 SNORA12-201ENST00000391162 147 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNU6-130P-201ENST00000411112 103 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 ELOCP20-201ENST00000422460 345 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 AL353705.1-201ENST00000433468 480 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 IFNA11P-201ENST00000446352 526 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 PCNPP5-201ENST00000452246 481 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 AC018630.3-201ENST00000542637 96 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 MIR5006-201ENST00000583027 110 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 Mico1.1-201ENST00000611698 204 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 U4.1-201ENST00000620349 87 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 U6.104-201ENST00000637979 90 ntBASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RNU6-26P-201ENST00000383985 107 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 Y_RNA.452-201ENST00000384202 108 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 MIR568-201ENST00000385036 95 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AL079342.1-201ENST00000401460 267 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AL161788.1-201ENST00000441805 169 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 UQCRBP2-201ENST00000447827 297 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC091179.3-201ENST00000474761 144 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RPL29P14-201ENST00000495837 428 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 SNORA40.9-201ENST00000515895 93 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RN7SKP21-201ENST00000516503 220 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 RNU2-44P-201ENST00000516795 194 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC004817.2-201ENST00000561794 651 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AL356280.1-201ENST00000603614 379 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 SNORD11B-201ENST00000607707 90 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AL449363.1-201ENST00000617815 186 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
CLRN3Q8NCR9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 COX6B1P7-201ENST00000430845 235 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 TPT1P12-201ENST00000448968 492 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 RPS23P5-201ENST00000495419 428 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR4436B2-201ENST00000581415 91 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR4503-201ENST00000582187 83 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR4480-201ENST00000582492 71 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR4436B1-201ENST00000583272 91 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR3149-201ENST00000584629 83 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MZT1P2-201ENST00000604387 248 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 FAM25E-202ENST00000608562 189 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AC011476.5-201ENST00000615594 130 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 MIR376A1-201ENST00000616574 68 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 LINC02555-201ENST00000563933 1951 ntBASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN3Q8NCR9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP191-201ENST00000362585 102 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 U8.12-201ENST00000384701 133 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 MIR627-201ENST00000384979 97 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms