Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AL590664.1-201ENST00000448065 339 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 RBMY2UP-201ENST00000453474 324 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 USP9YP23-201ENST00000455085 407 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 NACAP3-201ENST00000552100 481 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 AC024581.2-201ENST00000619986 252 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 AC130454.1-201ENST00000622948 401 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 AL450472.1-202ENST00000637286 180 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 FAM35BP-202ENST00000497389 3337 ntBASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PNLDC1Q8NA58 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AL049781.1-201ENST00000623195 3585 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNU6-222P-201ENST00000362438 107 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 SNORD56.3-201ENST00000363507 71 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 SNORD115-32-201ENST00000364079 82 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 Y_RNA.288-201ENST00000364854 92 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNU1-140P-201ENST00000365040 165 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 SNORA29-201ENST00000384183 140 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNY3P4-201ENST00000384428 101 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RPL21P38-201ENST00000418090 167 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNU6-1132P-201ENST00000459214 107 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC091179.1-201ENST00000461606 579 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RPL21P10-201ENST00000463521 490 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RPL7P49-201ENST00000471402 708 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 MED28P2-201ENST00000475771 317 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RNA5SP385-201ENST00000515947 110 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC090617.3-201ENST00000573670 475 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC009163.5-201ENST00000575421 637 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 MIR4506-201ENST00000584693 77 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 MIR3922-201ENST00000585192 84 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 AC019159.1-201ENST00000605094 187 ntBASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.88□□□□□ -1.95
PNLDC1Q8NA58 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC010615.1-201ENST00000594254 1764 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 SNORA63.1-201ENST00000362493 131 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 U3.13-201ENST00000364804 214 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU6-843P-201ENST00000384454 104 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 Y_RNA.562-201ENST00000384695 113 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 MIR183-201ENST00000384958 110 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 MIR34B-201ENST00000385076 84 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU2-38P-201ENST00000410856 79 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 EIF1AXP1-201ENST00000419267 435 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RPL21P40-201ENST00000428586 483 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AL353705.4-201ENST00000449661 238 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU7-87P-201ENST00000459343 62 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC098869.1-201ENST00000481627 292 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC006483.1-201ENST00000487308 313 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU6-1143P-201ENST00000516125 104 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 SNORA40.15-201ENST00000516884 107 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU6-388P-201ENST00000517012 105 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 RNU6-389P-201ENST00000517048 105 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC245166.1-201ENST00000521012 253 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AP003733.2-201ENST00000529409 171 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 HSPE1P20-201ENST00000538133 289 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 MIR5571-201ENST00000577998 113 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AL356157.2-201ENST00000605122 111 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 uc_338.1-201ENST00000612113 180 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 MIR6076-201ENST00000617521 113 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AC091903.1-201ENST00000624322 454 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
PNLDC1Q8NA58 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 GABRG2-229ENST00000641017 3628 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 OR56A5-201ENST00000340110 738 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 RNU6-1301P-201ENST00000362724 104 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 SNORD46.1-201ENST00000364139 104 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 U8.10-201ENST00000384260 133 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 RNU6-622P-201ENST00000384272 103 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 U3.19-201ENST00000390893 196 ntBASIC2.86□□□□□ -1.95
PNLDC1Q8NA58 MIR1302-6-201ENST00000408466 90 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms