Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC107294.1-201ENST00000609524 467 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC012531.5-201ENST00000611375 151 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AC100821.1-201ENST00000523153 2479 ntBASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9BQ8N6N2 AF127577.6-201ENST00000623352 2191 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AC004925.1-201ENST00000624256 2706 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RNU6-336P-201ENST00000364891 107 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RNU6-658P-201ENST00000384606 106 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RNU6-1168P-201ENST00000390831 104 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AL513331.1-201ENST00000411908 397 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 MTATP6P4-201ENST00000427725 675 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RPS15AP7-201ENST00000439294 405 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AC009296.1-201ENST00000443146 155 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RPS4XP2-201ENST00000458402 793 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 snoU13.30-201ENST00000458951 104 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 RPS4XP13-201ENST00000483219 789 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 SNORA70.14-201ENST00000516205 110 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 MIR4282-201ENST00000583613 67 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AC005828.6-201ENST00000606610 232 ntBASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.49□□□□□ -1.85
TTC9BQ8N6N2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC233981.2-201ENST00000611524 1614 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AL391516.1-201ENST00000554380 2449 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 Y_RNA.272-201ENST00000364696 102 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 RNU6-818P-201ENST00000364837 108 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 Y_RNA.343-201ENST00000365354 112 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 Y_RNA.446-201ENST00000384178 104 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 MIR32-201ENST00000384965 70 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 SNORD12B-201ENST00000410433 91 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC007560.1-201ENST00000426912 237 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC016700.2-201ENST00000446011 156 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 IFNA11P-201ENST00000446352 526 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 RPS29P2-201ENST00000479278 136 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 RNU6-377P-201ENST00000515965 102 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AC005046.1-201ENST00000608515 625 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 AL353748.2-201ENST00000622148 471 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TTC9BQ8N6N2 SNORD6-201ENST00000365444 73 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 RNU6-44P-201ENST00000384045 107 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 RPS4XP3-201ENST00000398541 413 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 TOMM22P1-201ENST00000418578 312 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AL162725.1-201ENST00000435405 301 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC073901.1-201ENST00000462471 408 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC010285.1-201ENST00000470580 392 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AP000870.1-201ENST00000472927 406 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 HSPE1P6-201ENST00000479457 291 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC006445.1-201ENST00000491925 405 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 RNU6-426P-201ENST00000516464 97 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 ZNF192P1-203ENST00000565888 810 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 MIR5004-201ENST00000579078 107 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC008749.1-201ENST00000597650 306 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC108706.1-201ENST00000611053 297 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 AC009541.1-201ENST00000438279 2662 ntBASIC3.47□□□□□ -1.85
TTC9BQ8N6N2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
TTC9BQ8N6N2 CEP170P1-201ENST00000502249 4587 ntBASIC3.46□□□□□ -1.85
TTC9BQ8N6N2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
TTC9BQ8N6N2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RNU4-9P-201ENST00000364951 139 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms