Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.632-201ENST00000459189 102 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 U8.21-201ENST00000459536 136 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC107626.1-201ENST00000471084 183 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC018437.1-201ENST00000492214 406 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNU6-559P-201ENST00000516151 98 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.675-201ENST00000516389 149 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNU6-612P-201ENST00000516909 102 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 FRG2DP-202ENST00000566967 323 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AL355877.2-201ENST00000603670 358 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC019193.3-201ENST00000609144 554 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC241585.2-209ENST00000638217 143 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.67-201ENST00000362870 100 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 SNORD56.1-201ENST00000362913 68 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 U8.8-201ENST00000365399 135 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 SNORD116-29-201ENST00000384516 83 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 RNU6-306P-201ENST00000384617 107 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AL513475.1-201ENST00000406602 315 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 SNORD19B-201ENST00000459623 84 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC090525.1-201ENST00000479116 478 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 GZMAP1-201ENST00000503054 631 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC114801.2-201ENST00000503825 781 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC109329.2-201ENST00000519658 482 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AP005902.1-201ENST00000521358 186 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 APOOP3-201ENST00000536787 586 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC103810.1-201ENST00000579873 453 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC090897.2-201ENST00000581715 130 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC078795.3-201ENST00000602913 472 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AP001836.1-201ENST00000604675 523 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC024581.2-201ENST00000619986 252 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AC097372.5-201ENST00000623665 376 ntBASIC2.85□□□□□ -1.95
VPS52Q8N1B4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS52Q8N1B4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.11-201ENST00000362375 109 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.58-201ENST00000362807 102 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.154-201ENST00000363624 102 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 RNU6-1188P-201ENST00000363795 107 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 RNY3P1-201ENST00000365085 102 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 RNY3-201ENST00000365484 102 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.490-201ENST00000384413 102 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 SNORA67.4-201ENST00000384688 142 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 RNU6-370P-201ENST00000411008 104 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 MTND4P28-201ENST00000426217 387 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 USP9YP30-201ENST00000430729 455 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC124916.1-201ENST00000444020 547 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AL441985.1-201ENST00000457727 251 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AP002770.2-201ENST00000543613 532 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC027176.1-201ENST00000560204 514 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS52Q8N1B4 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC011494.1-201ENST00000596454 237 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AL356157.2-201ENST00000605122 111 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AC018889.1-201ENST00000605372 397 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 AP000654.2-201ENST00000605633 586 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 MIR8076-201ENST00000611401 83 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.84□□□□□ -1.95
VPS52Q8N1B4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS52Q8N1B4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
VPS52Q8N1B4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RNU6-227P-201ENST00000362865 103 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 SNORD32A-201ENST00000364805 84 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RNU6-933P-201ENST00000384424 107 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 RNU6-692P-201ENST00000384496 107 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 MIR147B-201ENST00000390185 80 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 MTCYBP4-201ENST00000401524 249 ntBASIC2.83□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms