Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX5Q8N196 SNORD116-18-201ENST00000383961 92 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 RNU6-1081P-201ENST00000384537 107 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX5Q8N196 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX5Q8N196 RNU7-23P-201ENST00000459465 62 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AP002001.1-203ENST00000534002 267 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 RPL23AP97-201ENST00000568955 471 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AC015912.2-201ENST00000571053 181 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AC012493.2-201ENST00000595083 291 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AL133393.1-201ENST00000603277 287 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AC007179.3-201ENST00000604976 235 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 PCGEM1.1-201ENST00000613431 131 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AL121772.2-201ENST00000614331 297 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SIX5Q8N196 AL034408.1-202ENST00000636088 415 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.35□□□□□ -1.71
SIX5Q8N196 AC010889.1-201ENST00000566193 2666 ntBASIC4.35□□□□□ -1.71
SIX5Q8N196 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX5Q8N196 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX5Q8N196 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX5Q8N196 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX5Q8N196 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX5Q8N196 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX5Q8N196 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX5Q8N196 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SIX5Q8N196 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX5Q8N196 RNA5SP119-201ENST00000362715 117 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 RNU6-529P-201ENST00000363383 104 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 U3.9-201ENST00000363823 204 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 Y_RNA.441-201ENST00000384123 112 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX5Q8N196 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX5Q8N196 AC027124.2-201ENST00000428249 105 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 AL714022.1-201ENST00000439897 151 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX5Q8N196 AC010099.1-201ENST00000455434 375 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 RPL31P41-201ENST00000477967 372 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 RNA5SP73-201ENST00000516744 108 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX5Q8N196 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX5Q8N196 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX5Q8N196 EIF4A1P12-201ENST00000551910 141 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 TCL6_2.1-201ENST00000615162 119 ntBASIC4.34□□□□□ -1.71
SIX5Q8N196 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX5Q8N196 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
SIX5Q8N196 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SIX5Q8N196 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
SIX5Q8N196 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.34□□□□□ -1.72
SIX5Q8N196 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
SIX5Q8N196 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.72
SIX5Q8N196 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SIX5Q8N196 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX5Q8N196 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SIX5Q8N196 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX5Q8N196 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 SNORA9-201ENST00000384215 133 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 AL592291.1-201ENST00000403830 352 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SIX5Q8N196 U3.39-201ENST00000408569 239 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 RNA5SP201-201ENST00000410316 124 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX5Q8N196 AC004386.2-201ENST00000441858 148 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 RNU1-117P-201ENST00000517041 158 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX5Q8N196 TGIF1P1-201ENST00000558095 802 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 MIR5006-201ENST00000583027 110 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 AC019176.2-201ENST00000611579 315 ntBASIC4.33□□□□□ -1.72
SIX5Q8N196 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX5Q8N196 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX5Q8N196 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX5Q8N196 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX5Q8N196 Y_RNA.40-201ENST00000362645 93 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 Y_RNA.238-201ENST00000364441 102 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 Y_RNA.357-201ENST00000365487 109 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U3.40-201ENST00000408706 208 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU2-2P-201ENST00000410396 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 snoU13.14-201ENST00000459372 104 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU6-344P-201ENST00000516635 111 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU2-12P-201ENST00000517216 168 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX5Q8N196 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX5Q8N196 RNU2-4P-201ENST00000606190 192 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.15-201ENST00000611544 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.16-201ENST00000613119 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.12-201ENST00000613778 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 uc_338.32-201ENST00000615087 172 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 U2.9-201ENST00000615427 191 ntBASIC4.32□□□□□ -1.72
SIX5Q8N196 AL138880.2-201ENST00000616214 239 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms