Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-692P-201ENST00000384496 107 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 MIR95-201ENST00000385072 81 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 SNORD73A-201ENST00000386062 65 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 CBX3P9-201ENST00000402326 552 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AIMP1P2-201ENST00000425294 312 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 C8orf59P1-201ENST00000429930 303 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 ERLEC1P1-201ENST00000433806 578 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 MTND1P34-201ENST00000438556 671 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AL021397.1-201ENST00000451806 248 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 SNORA19.2-201ENST00000516013 114 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-586P-201ENST00000517265 104 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC087854.1-201ENST00000519706 414 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-323P-201ENST00000521915 107 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 VN1R107P-201ENST00000601784 209 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AL670379.2-201ENST00000604983 252 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AL357078.3-201ENST00000607528 618 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 U4atac.1-201ENST00000618345 95 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC090517.3-201ENST00000625170 141 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 AC241585.2-209ENST00000638217 143 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-451P-201ENST00000362921 107 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RNY3P3-201ENST00000363816 102 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MIR524-201ENST00000385242 87 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MIR1261-201ENST00000408659 82 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 SNRPGP7-201ENST00000469016 106 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 RPL30P1-201ENST00000488676 339 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 SNORA48.11-201ENST00000517015 89 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MTND1P35-201ENST00000526739 508 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MIR5692C1-201ENST00000585309 91 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 U4.5-201ENST00000617137 123 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MIR203B-201ENST00000636080 86 ntBASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
C9orf40Q8IXQ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 SNORD114-1-201ENST00000362705 72 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 RNY4P14-201ENST00000363656 96 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-522P-201ENST00000364497 107 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 RNU4-12P-201ENST00000365233 139 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 EIF4E2P1-201ENST00000393781 255 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AL591034.2-201ENST00000402839 359 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 SNAP23P1-201ENST00000433229 246 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AP005597.4-201ENST00000526762 229 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC025423.5-201ENST00000550230 219 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC009314.1-201ENST00000603871 304 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 AC121333.1-201ENST00000567488 2709 ntBASIC1.85□□□□□ -2.11
C9orf40Q8IXQ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-43P-201ENST00000384302 107 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 RN7SKP158-201ENST00000410453 326 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 MTCO1P21-201ENST00000416634 589 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 RPS15AP10-201ENST00000432472 382 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC009238.1-201ENST00000442165 424 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 MTCO2P3-201ENST00000442543 421 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC009237.6-201ENST00000446969 424 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AL353752.1-201ENST00000454946 260 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 UBL5P3-201ENST00000475112 231 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC083904.1-201ENST00000487828 231 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC068781.1-201ENST00000488231 618 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms