Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC130289.1-201ENST00000577321 73 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC090897.2-201ENST00000581715 130 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 MIR3922-201ENST00000585192 84 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC009779.6-201ENST00000603972 165 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC069200.1-201ENST00000609511 323 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 MIR6076-201ENST00000617521 113 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 SNORD46.1-201ENST00000364139 104 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 RNA5SP72-201ENST00000364442 117 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-622P-201ENST00000384272 103 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC093578.1-201ENST00000415219 368 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC010099.1-201ENST00000455434 375 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 RN7SL293P-201ENST00000481765 281 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC026784.1-201ENST00000507986 352 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 FTH1P9-201ENST00000513251 355 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC016256.1-201ENST00000547971 354 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 MIR4643-201ENST00000577473 78 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AL078605.1-201ENST00000603529 500 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AL365434.2-201ENST00000607979 234 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 U4.6-201ENST00000621618 127 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
TRIM48Q8IWZ4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.46□□□□□ -1.85
TRIM48Q8IWZ4 AC135776.4-201ENST00000624300 1904 ntBASIC3.46□□□□□ -1.85
TRIM48Q8IWZ4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.46□□□□□ -1.85
TRIM48Q8IWZ4 AC004944.1-201ENST00000517807 3059 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RNU6-626P-201ENST00000363354 107 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 Y_RNA.274-201ENST00000364714 101 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 SNORD63-201ENST00000384262 68 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 MIR329-1-201ENST00000385028 80 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 U3.19-201ENST00000390893 196 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RNU2-49P-201ENST00000410666 184 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 AC078809.1-201ENST00000427601 140 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RPS15AP5-201ENST00000436276 388 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RN7SKP49-201ENST00000516675 260 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 AC022080.3-201ENST00000544433 482 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 AL138963.2-201ENST00000605137 226 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 AC137590.2-201ENST00000619709 240 ntBASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM48Q8IWZ4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU6-961P-201ENST00000363893 105 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU6-290P-201ENST00000365212 101 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU4-70P-201ENST00000384579 139 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNA5SP390-201ENST00000410191 113 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC138623.1-201ENST00000418060 216 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC012306.1-201ENST00000423267 114 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AL358075.3-201ENST00000426289 226 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AL714022.1-201ENST00000439897 151 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC010095.1-201ENST00000443543 144 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RPL21P10-201ENST00000463521 490 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC090525.1-201ENST00000479116 478 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RPL26P26-201ENST00000480251 434 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU2-27P-201ENST00000516185 142 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AP006245.1-201ENST00000522549 120 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC021231.3-201ENST00000558497 370 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 BX284668.6-201ENST00000606899 438 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.45□□□□□ -1.86
TRIM48Q8IWZ4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM48Q8IWZ4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms