Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNA5SP240-201ENST00000365355 128 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 RN7SKP32-201ENST00000410167 303 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 RNA5SP425-201ENST00000410336 112 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 MTND3P8-201ENST00000412909 339 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 MTCO3P46-201ENST00000425787 232 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AMD1P1-201ENST00000457220 922 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 snoU13.23-201ENST00000458863 104 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 snoU13.14-201ENST00000459372 104 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 RNU6-329P-201ENST00000459618 107 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 SNRPGP7-201ENST00000469016 106 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 RNU6-612P-201ENST00000516909 102 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.84□□□□□ -1.95
HERC6Q8IVU3 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC091135.1-201ENST00000585943 307 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AP001836.1-201ENST00000604675 523 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 AC018889.1-201ENST00000605372 397 ntBASIC2.84□□□□□ -1.95
HERC6Q8IVU3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HERC6Q8IVU3 RNU6-227P-201ENST00000362865 103 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNU4-56P-201ENST00000364700 142 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNU2-63P-201ENST00000410792 194 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AL030996.1-201ENST00000411430 235 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AP000275.1-201ENST00000411943 390 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AC078809.1-201ENST00000427601 140 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AC140059.1-201ENST00000489238 361 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RPL39P5-202ENST00000512505 151 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNA5SP320-201ENST00000516263 124 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 SNORA9.3-201ENST00000516383 129 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 RNU6-273P-201ENST00000516937 96 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 TRAV32-201ENST00000553993 340 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AC025253.1-201ENST00000613623 543 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AC008121.3-201ENST00000618726 433 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
HERC6Q8IVU3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HERC6Q8IVU3 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AP000560.1-201ENST00000624150 1937 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 SNORD81.2-201ENST00000365153 76 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RNU6-142P-201ENST00000384019 107 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RNU6-790P-201ENST00000384479 105 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RNU6-692P-201ENST00000384496 107 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RNA5SP492-201ENST00000411330 114 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AL135786.1-201ENST00000415892 214 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.82□□□□□ -1.96
HERC6Q8IVU3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC130509.1-201ENST00000464158 433 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RPL30P1-201ENST00000488676 339 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC016632.1-201ENST00000503994 196 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC022447.4-201ENST00000504053 364 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AP005902.1-201ENST00000521358 186 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RAB11AP2-201ENST00000545905 639 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC007375.1-201ENST00000554513 578 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.82□□□□□ -1.96
HERC6Q8IVU3 MIR4648-201ENST00000580107 72 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 MIR3942-201ENST00000585264 109 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RPL30P11-203ENST00000598995 310 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 Y_RNA.804-201ENST00000615262 101 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 AC104985.2-201ENST00000620598 500 ntBASIC2.82□□□□□ -1.96
HERC6Q8IVU3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 U3.13-201ENST00000364804 214 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 RNU6-220P-201ENST00000390919 107 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 CBX3P9-201ENST00000402326 552 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AL590556.1-201ENST00000423231 483 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 SRIP1-201ENST00000489235 288 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 RNU6-566P-201ENST00000516790 107 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 RNA5SP454-201ENST00000517231 127 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 HSPE1P4-201ENST00000550617 308 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AC026464.5-201ENST00000562497 722 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 MIR5571-201ENST00000577998 113 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AC090616.3-201ENST00000582184 217 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 MIR3136-201ENST00000583498 78 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms