Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MIR5701-3-201ENST00000578890 82 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 MIR5701-1-201ENST00000585138 82 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 MIR5701-2-201ENST00000615634 82 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 AC090617.7-201ENST00000623952 126 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 AL606534.2-204ENST00000635008 178 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 ZNF299P-201ENST00000406845 1804 ntBASIC3.39□□□□□ -1.87
UBE3BQ7Z3V4 CDC27P3-201ENST00000635418 1910 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 MTND5P9-201ENST00000503854 1755 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-227P-201ENST00000362865 103 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 SNORD50.1-201ENST00000362987 71 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-595P-201ENST00000363944 107 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-99P-201ENST00000364721 107 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-898P-201ENST00000365627 104 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-784P-201ENST00000384330 106 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-463P-201ENST00000384340 107 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RPS4XP3-201ENST00000398541 413 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNA5SP38-201ENST00000410750 119 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AL353997.1-201ENST00000432936 108 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC079354.2-201ENST00000453523 154 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC112492.4-201ENST00000456549 352 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-928P-201ENST00000516876 104 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 MIR3609-201ENST00000582661 80 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC104695.3-201ENST00000604052 296 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 HSPE1P7-201ENST00000604681 321 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 SNORD58B-201ENST00000607313 66 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC009318.2-201ENST00000610917 651 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 MTND5P7-201ENST00000413558 1798 ntBASIC3.38□□□□□ -1.87
UBE3BQ7Z3V4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC008669.1-201ENST00000565823 2178 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.39-201ENST00000362620 98 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.527-201ENST00000384573 102 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 BMS1P22-201ENST00000414726 313 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC099548.1-201ENST00000421443 426 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 MTCYBP10-201ENST00000424905 650 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AC105758.1-201ENST00000506038 399 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 MTND4LP22-201ENST00000508209 276 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 SNORA31.18-201ENST00000517043 134 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 NACAP3-201ENST00000552100 481 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 AL079305.1-201ENST00000623159 3008 ntBASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE3BQ7Z3V4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 MTND3P9-201ENST00000429526 346 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 RPL30P14-201ENST00000482744 348 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 AC010186.2-204ENST00000537668 439 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 MIR3605-201ENST00000583214 100 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 HMGB1P24-202ENST00000615653 685 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 MIR4272-201ENST00000635924 64 ntBASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE3BQ7Z3V4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 MAPK10-322ENST00000641485 4530 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 RNU1-100P-201ENST00000365255 165 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 RNA5SP344-201ENST00000411081 104 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 HMGB3P2-201ENST00000411913 584 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 BPY2DP-201ENST00000422208 265 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 HMGN2P10-201ENST00000448085 265 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 RPL30P10-201ENST00000488148 337 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 RNU7-4P-201ENST00000516961 62 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms