Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
TRIM40Q6P9F5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM40Q6P9F5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 ZNF680P1-201ENST00000436625 1469 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU1-58P-201ENST00000362413 163 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU6-1120P-201ENST00000362988 108 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU6-1141P-201ENST00000364520 107 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU6-43P-201ENST00000384302 107 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU6-348P-201ENST00000384386 107 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU6-692P-201ENST00000384496 107 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RNU11-3P-201ENST00000391111 133 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 MTATP6P18-201ENST00000417994 673 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL117339.3-201ENST00000418733 162 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 MTND4P32-201ENST00000437189 1237 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL360221.1-201ENST00000445989 335 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL356010.1-201ENST00000456364 102 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 ARL2BPP4-201ENST00000506854 471 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC093259.1-201ENST00000509755 300 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 MTND3P5-201ENST00000512798 333 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 Y_RNA.695-201ENST00000516715 107 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 RN7SKP219-201ENST00000516825 296 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 VN1R107P-201ENST00000601784 209 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC002044.1-201ENST00000606707 158 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC008536.2-201ENST00000607284 349 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 SNORD98-201ENST00000636377 67 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AP000560.1-201ENST00000624150 1937 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 AC131280.1-202ENST00000624067 4211 ntBASIC1.57□□□□□ -2.16
TRIM40Q6P9F5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RNU4-15P-201ENST00000362613 141 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RNU6-266P-201ENST00000364225 107 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 Y_RNA.399-201ENST00000383955 105 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 MIR597-201ENST00000384968 97 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RNU6-903P-201ENST00000391270 109 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RPS29P13-201ENST00000402041 169 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AL356432.1-201ENST00000405809 419 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 USP9YP29-201ENST00000445112 563 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 RNU2-44P-201ENST00000516795 194 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC007834.2-201ENST00000536310 343 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 TRAV32-201ENST00000553993 340 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AGGF1P4-201ENST00000568249 801 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 MIR4528-201ENST00000577763 90 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC008088.1-201ENST00000580993 280 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 MIR3136-201ENST00000583498 78 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC107304.1-201ENST00000604229 296 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC087752.4-201ENST00000605911 462 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AL158063.1-201ENST00000615349 536 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 AC136475.10-201ENST00000620253 385 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 MTND4P23-201ENST00000447723 1363 ntBASIC1.56□□□□□ -2.16
TRIM40Q6P9F5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 RNU6-552P-201ENST00000362869 119 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 Y_RNA.159-201ENST00000363674 87 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 SNORD32B-201ENST00000364460 84 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 RNA5SP212-201ENST00000391223 107 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC010975.2-201ENST00000427781 588 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC244670.1-201ENST00000436879 112 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 SNRPFP3-201ENST00000457792 225 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 SNRPGP7-201ENST00000469016 106 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC145146.1-201ENST00000496370 254 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 RNU6-991P-201ENST00000516168 107 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AP005660.1-201ENST00000522972 293 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AL137161.1-201ENST00000532231 390 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 MIR3941-201ENST00000582572 103 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 MIR4769-201ENST00000584126 77 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AP000654.2-201ENST00000605633 586 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AL022345.1-201ENST00000607292 135 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms