Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AC100830.2-201ENST00000581636 240 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 CTHRC1P1-201ENST00000605383 469 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL449363.1-201ENST00000617815 186 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 U4.7-201ENST00000638126 106 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 CASC19-280ENST00000642102 1351 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RNU6-78P-201ENST00000362897 107 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.86-201ENST00000363020 111 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RNU6-254P-201ENST00000363377 107 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.135-201ENST00000363439 95 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RNU6-1280P-201ENST00000365211 107 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AL030996.1-201ENST00000411430 235 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC138393.2-201ENST00000414742 246 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 PTGES3P4-201ENST00000426243 356 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 TOMM20P4-201ENST00000427861 435 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RPL7P43-201ENST00000478876 753 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC018710.1-201ENST00000506509 158 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC109479.2-201ENST00000517842 174 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC087854.1-201ENST00000519706 414 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 VN1R107P-201ENST00000601784 209 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC008121.1-201ENST00000603244 268 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RNU6-91P-201ENST00000607774 107 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AL121757.2-201ENST00000611223 313 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AC138627.2-201ENST00000624202 601 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ZNF544Q6NX49 MTND5P6-201ENST00000422338 1798 ntBASIC1.93□□□□□ -2.1
ZNF544Q6NX49 RNU6-37P-201ENST00000362692 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.166-201ENST00000363730 102 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-11P-201ENST00000364234 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU5E-7P-201ENST00000365290 117 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-25P-201ENST00000383873 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-1-201ENST00000383898 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-128P-201ENST00000383976 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-48P-201ENST00000384161 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-36P-201ENST00000384172 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-4P-201ENST00000384205 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-5P-201ENST00000384238 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-3P-201ENST00000384314 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-16P-201ENST00000384385 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-15P-201ENST00000384534 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-2-201ENST00000384627 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-29P-201ENST00000384637 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-9-201ENST00000384776 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-33P-201ENST00000384793 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AL359672.1-201ENST00000442302 409 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AC010095.1-201ENST00000443543 144 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 snoU109.2-201ENST00000459316 135 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 MED28P2-201ENST00000475771 317 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-864P-201ENST00000516256 108 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU5B-3P-201ENST00000516601 115 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU7-193P-201ENST00000516723 65 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RN7SKP256-201ENST00000517201 314 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 SCARNA11.3-201ENST00000517276 130 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AP005902.1-201ENST00000521358 186 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AP005597.4-201ENST00000526762 229 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.92□□□□□ -2.1
ZNF544Q6NX49 RNU6-6P-201ENST00000606623 107 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 AC100810.6-201ENST00000638068 285 ntBASIC1.92□□□□□ -2.1
ZNF544Q6NX49 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ZNF544Q6NX49 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.373-201ENST00000365600 103 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RNU6-843P-201ENST00000384454 104 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RNU6-831P-201ENST00000384548 107 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RNU6-19P-201ENST00000384718 107 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RPS29P13-201ENST00000402041 169 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 RPL21P111-201ENST00000418453 477 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 AC018634.1-201ENST00000437554 401 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 AC004383.1-201ENST00000438135 289 ntBASIC1.91□□□□□ -2.1
ZNF544Q6NX49 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms