Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.793-201ENST00000411222 111 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AC002075.2-201ENST00000425207 252 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 EIF1P2-201ENST00000428233 350 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 GPM6BP3-201ENST00000442797 145 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 RPS4XP13-201ENST00000483219 789 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MIR4738-201ENST00000579134 87 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MIR5695-201ENST00000579717 85 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AL356157.2-201ENST00000605122 111 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AL162274.2-201ENST00000614406 332 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MIR6134-201ENST00000617606 109 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF40BQ6NWY9 CEP170P1-201ENST00000502249 4587 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 ZNF826P-207ENST00000622273 1910 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 Y_RNA.83-201ENST00000363005 113 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-1280P-201ENST00000365211 107 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-318P-201ENST00000384283 103 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RNU6-21P-201ENST00000384710 107 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 SNORD58.1-201ENST00000391313 66 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RN7SKP111-201ENST00000410349 271 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 SNORD12B-201ENST00000410433 91 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RHEBP3-201ENST00000411920 351 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AC006028.1-201ENST00000438379 402 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AC104332.1-201ENST00000440471 797 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RPS29P31-201ENST00000446147 164 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 RNA5SP341-201ENST00000516261 117 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 HSPE1P4-201ENST00000550617 308 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 MIR4276-201ENST00000584832 70 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AL110115.1-201ENST00000614396 364 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 AC005296.1-201ENST00000616145 209 ntBASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF40BQ6NWY9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 RNA5SP361-201ENST00000362686 118 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SNORD32A-201ENST00000364805 84 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SNORD63-201ENST00000384262 68 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 MIR544A-201ENST00000384855 91 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 MIR1183-201ENST00000408856 89 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AC074117.2-201ENST00000417130 397 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 YPEL5P1-201ENST00000419731 367 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 COTL1P1-201ENST00000422309 375 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AC006989.1-201ENST00000427212 131 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AC005002.2-201ENST00000438228 269 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SSXP4-201ENST00000451349 245 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 RPL26P9-201ENST00000457466 433 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 RPL27AP5-201ENST00000469428 449 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 MRPL42P6-201ENST00000486397 371 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AC016256.1-201ENST00000547971 354 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AL138963.2-201ENST00000605137 226 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 SNORD113-5-201ENST00000607261 78 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 AC007496.3-201ENST00000624987 3443 ntBASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF40BQ6NWY9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 Z83843.1-201ENST00000604070 3685 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 ADAM3A-203ENST00000461344 2157 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AL356274.2-201ENST00000624379 3752 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AL357075.1-201ENST00000404107 726 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 FTH1P15-201ENST00000406984 280 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 RPL23AP95-201ENST00000426806 265 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC096638.1-201ENST00000444678 216 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 HSPE1P25-201ENST00000455484 251 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AL136097.1-201ENST00000456945 913 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC016632.1-201ENST00000503994 196 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC097462.2-201ENST00000504623 481 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 SEPT14P8-201ENST00000508026 178 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 FCF1P8-201ENST00000510322 597 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 RNU1-61P-201ENST00000516107 151 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 RNU7-110P-201ENST00000516891 62 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 AC048347.1-201ENST00000624621 427 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms