Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.54□□□□□ -2
SNX30Q5VWJ9 SCOCP1-201ENST00000554676 349 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.54□□□□□ -2
SNX30Q5VWJ9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.54□□□□□ -2
SNX30Q5VWJ9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
SNX30Q5VWJ9 AL034555.1-201ENST00000604816 211 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 ELOCP5-201ENST00000604924 333 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 AC104458.1-201ENST00000608243 463 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 SNORD98-201ENST00000636377 67 ntBASIC2.54□□□□□ -2
SNX30Q5VWJ9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNX30Q5VWJ9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNX30Q5VWJ9 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 RNU6-933P-201ENST00000384424 107 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 HMGB3P2-201ENST00000411913 584 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC092989.1-201ENST00000481235 277 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 MTCO1P29-201ENST00000496868 288 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC234781.5-201ENST00000508429 271 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 FAM206BP-201ENST00000510179 541 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 RNU6-567P-201ENST00000516746 107 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 RNU6-612P-201ENST00000516909 102 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 SNORD53-201ENST00000579969 78 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.53□□□□□ -2
SNX30Q5VWJ9 AC064836.2-201ENST00000609491 462 ntBASIC2.53□□□□□ -2
SNX30Q5VWJ9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
SNX30Q5VWJ9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC069528.2-201ENST00000624849 1991 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 RNU6-227P-201ENST00000362865 103 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 RNU1-91P-201ENST00000364746 163 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 SNORA41-201ENST00000384675 132 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 RNA5SP508-201ENST00000411327 119 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AL353752.1-201ENST00000454946 260 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 RPL9P9-202ENST00000466501 579 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC107222.1-201ENST00000510899 637 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 IGLV3-17-201ENST00000519099 244 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC118273.2-201ENST00000532092 465 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC021231.3-201ENST00000558497 370 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AP003465.2-201ENST00000602571 373 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 FAM157A-202ENST00000615155 405 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SNX30Q5VWJ9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 SNORA25B-201ENST00000365507 128 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 Y_RNA.414-201ENST00000384011 101 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 RNU4-53P-201ENST00000410828 140 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 VN1R36P-201ENST00000414936 291 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 CBX3P6-201ENST00000430257 527 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AL031659.1-201ENST00000447075 539 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC096745.1-201ENST00000509945 370 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC092436.3-201ENST00000511788 257 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC008549.1-201ENST00000512900 643 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC025465.4-201ENST00000513422 638 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 CYCSP26-201ENST00000534107 320 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC016256.1-201ENST00000547971 354 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 TRAV32-201ENST00000553993 340 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 SNORA59B-202ENST00000578183 701 ntBASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX30Q5VWJ9 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms