Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AC130289.1-201ENST00000577321 73 ntBASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 AL162713.1-201ENST00000604480 262 ntBASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 AL391261.4-201ENST00000616012 481 ntBASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 AC007496.3-201ENST00000624987 3443 ntBASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNAP47Q5SQN1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 MTND5P35-201ENST00000557537 1720 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.179-201ENST00000363844 90 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 RNU6-209P-201ENST00000384118 107 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 SNORA57.3-201ENST00000411095 141 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AL159169.1-201ENST00000421119 127 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 MTND5P15-201ENST00000434246 349 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AC006517.1-201ENST00000480485 328 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.700-201ENST00000516806 100 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 CYCSP23-201ENST00000519781 313 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 RRN3P3-201ENST00000549207 578 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AC233702.2-202ENST00000562547 291 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AC039056.2-201ENST00000622261 511 ntBASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNAP47Q5SQN1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 GABRG2-229ENST00000641017 3628 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.269-201ENST00000364685 89 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNU6-1175P-201ENST00000365200 107 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNU6-326P-201ENST00000365480 107 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNU6-793P-201ENST00000384233 104 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.785-201ENST00000384290 109 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNU6-378P-201ENST00000384324 107 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNA5SP201-201ENST00000410316 124 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC017079.2-201ENST00000416102 485 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC091179.3-201ENST00000474761 144 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RNU2-31P-201ENST00000516954 155 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC005176.2-201ENST00000596933 147 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 MZT1P2-201ENST00000604387 248 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AC037487.3-201ENST00000606668 112 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AL121772.2-201ENST00000614331 297 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 AL591424.2-201ENST00000617023 128 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
SNAP47Q5SQN1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.117-201ENST00000363294 101 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MIR186-201ENST00000384988 86 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MIR767-201ENST00000390228 109 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 UQCRBP2-201ENST00000447827 297 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AL133547.1-201ENST00000448546 220 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AC103975.1-201ENST00000482506 483 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 RPL23AP70-201ENST00000483361 460 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AC074133.1-201ENST00000515696 183 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MIR4643-201ENST00000577473 78 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AC098479.1-201ENST00000609225 154 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 uc_338.14-201ENST00000613162 166 ntBASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNAP47Q5SQN1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.44-201ENST00000362676 108 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 RNU6-1210P-201ENST00000363775 107 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 RNU4-70P-201ENST00000384579 139 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 Y_RNA.569-201ENST00000384749 103 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 MIR320B2-201ENST00000408479 138 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 HMGN2P31-201ENST00000432430 273 ntBASIC3.78□□□□□ -1.8
SNAP47Q5SQN1 AL358232.1-201ENST00000448030 501 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms