Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.605-201ENST00000410577 105 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RPL21P40-201ENST00000428586 483 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 MTCO3P29-201ENST00000432119 779 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 Z82188.1-201ENST00000436709 154 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AL353752.1-201ENST00000454946 260 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC109925.1-201ENST00000478069 331 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC021146.2-201ENST00000504736 556 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC021231.3-201ENST00000558497 370 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC010928.2-201ENST00000588017 287 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC008737.2-201ENST00000599446 118 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 SNORD58B-201ENST00000607313 66 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AL359198.2-201ENST00000611836 194 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC137590.2-201ENST00000619709 240 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 MIR4272-201ENST00000635924 64 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AL450472.1-202ENST00000637286 180 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.91
KHDC1Q4VXA5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 RNU6-529P-201ENST00000363383 104 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 U3.19-201ENST00000390893 196 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 RNU6-985P-201ENST00000410182 104 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AC009296.1-201ENST00000443146 155 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 snoU13.14-201ENST00000459372 104 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AF186996.7-201ENST00000492781 209 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 SNORA40.14-201ENST00000516543 86 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.706-201ENST00000516933 99 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 RN7SKP57-201ENST00000517248 293 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 RMST_6.1-201ENST00000611980 203 ntBASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.14□□□□□ -1.91
KHDC1Q4VXA5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 SNORA9-201ENST00000384215 133 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.485-201ENST00000384395 102 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.645-201ENST00000391229 102 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 U3.26-201ENST00000391236 204 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 SAR1AP2-201ENST00000392696 594 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 CHEK2P4-201ENST00000450340 246 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC087477.1-201ENST00000465747 340 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AIG1P1-201ENST00000503376 148 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 RNU6-911P-201ENST00000516523 104 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.721-201ENST00000517207 102 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC079598.5-201ENST00000547460 117 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 UBL5P2-201ENST00000583788 219 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC136443.5-201ENST00000603741 370 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AL162730.1-201ENST00000605734 292 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AL162373.1-201ENST00000620433 407 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC018692.3-201ENST00000623929 123 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC243829.7-201ENST00000633081 225 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 AC091812.1-201ENST00000432235 1948 ntBASIC3.13□□□□□ -1.91
KHDC1Q4VXA5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RNU6-874P-201ENST00000362390 105 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 SNORA38.1-201ENST00000364172 131 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RNU6-17P-201ENST00000384245 107 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RNU6-18P-201ENST00000384527 107 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC113618.1-201ENST00000416747 285 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms