Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU2-46P-201ENST00000517038 113 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF404Q494X3 MIR3136-201ENST00000583498 78 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL022161.1-201ENST00000604390 213 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC022960.3-201ENST00000619794 441 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC022513.1-201ENST00000624512 117 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-37P-201ENST00000362692 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-11P-201ENST00000364234 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-25P-201ENST00000383873 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-1-201ENST00000383898 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-26P-201ENST00000383985 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-48P-201ENST00000384161 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-36P-201ENST00000384172 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-4P-201ENST00000384205 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-5P-201ENST00000384238 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-3P-201ENST00000384314 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-16P-201ENST00000384385 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-15P-201ENST00000384534 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-2-201ENST00000384627 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-29P-201ENST00000384637 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-9-201ENST00000384776 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-33P-201ENST00000384793 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-550P-201ENST00000391057 101 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF404Q494X3 FGF7P8-201ENST00000402994 292 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-293P-201ENST00000411259 106 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC073614.1-201ENST00000438690 650 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC079448.1-201ENST00000449377 373 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF404Q494X3 snoU13.9-201ENST00000458927 103 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 FABP5P5-201ENST00000515537 406 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-377P-201ENST00000515965 102 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-410P-201ENST00000517006 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC090572.1-201ENST00000519251 160 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF404Q494X3 MIR4422-201ENST00000581938 83 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC008752.3-201ENST00000588113 712 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC110760.3-201ENST00000598794 467 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AL590229.1-201ENST00000603497 542 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC090578.1-201ENST00000604955 591 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 RNU6-6P-201ENST00000606623 107 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF404Q494X3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.14□□□□□ -2.23
ZNF404Q494X3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF404Q494X3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC245060.5-201ENST00000610778 3293 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AP000560.1-201ENST00000624150 1937 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 RNU6-715P-201ENST00000365204 103 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 RNU6-142P-201ENST00000384019 107 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC123900.1-201ENST00000420390 96 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC011233.1-201ENST00000422812 283 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AL669831.1-202ENST00000428504 417 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF404Q494X3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC087477.1-201ENST00000465747 340 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AL163540.1-201ENST00000485382 386 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.13□□□□□ -2.23
ZNF404Q494X3 SNORA3.4-201ENST00000515969 96 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF404Q494X3 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 MIR5094-201ENST00000578766 85 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF404Q494X3 AP001485.1-201ENST00000604799 199 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 BNIP3P10-201ENST00000605360 577 ntBASIC1.13□□□□□ -2.23
ZNF404Q494X3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ZNF404Q494X3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-112P-201ENST00000363599 104 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-43P-201ENST00000384302 107 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-692P-201ENST00000384496 107 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC004965.1-201ENST00000413033 213 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 MTCO3P41-201ENST00000414801 328 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AL590135.1-201ENST00000422215 156 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC019205.3-201ENST00000424573 156 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC010975.2-201ENST00000427781 588 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 MTND5P25-201ENST00000430499 799 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC244670.1-201ENST00000436879 112 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 MTCO1P44-201ENST00000441935 243 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC016700.2-201ENST00000446011 156 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU1-123P-201ENST00000458950 160 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms